Entry Detail



General Information

Database ID:exR0208881
RNA Name:ACBD5
RNA Type:mRNA
Chromosome:chr10
Starnd:-
Coordinate:
Start Site(bp):27195214End Site(bp):27242130
External Links:ENSG00000107897



Disease Information

Disease Name:Subarachnoid Hemorrhage
Disease Category:Nervous System Diseases
MeSH ID:D013345
Type:Diseases Category/Nervous System Diseases
Alias:SAH (Subarachnoid Hemorrhage)//SAHs (Subarachnoid Hemorrhage)//Hemorrhage, Subarachnoid//Hemorrhages, Subarachnoid//Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Aneurysmal//Aneurysmal Subarachnoid Hemorrhage//Aneurysmal Subarachnoid Hemorrhages//Hemorrhage, Aneurysmal Subarachnoid//Hemorrhages, Aneurysmal Subarachnoid//Subarachnoid Hemorrhages, Aneurysmal//Subarachnoid Hemorrhage, Spontaneous//Hemorrhage, Spontaneous Subarachnoid//Hemorrhages, Spontaneous Subarachnoid//Spontaneous Subarachnoid Hemorrhage//Spontaneous Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Spontaneous//Perinatal Subarachnoid Hemorrhage//Hemorrhage, Perinatal Subarachnoid//Hemorrhages, Perinatal Subarachnoid//Perinatal Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Perinatal//Subarachnoid Hemorrhages, Perinatal//Subarachnoid Hemorrhage, Intracranial//Hemorrhage, Intracranial Subarachnoid//Hemorrhages, Intracranial Subarachnoid//Intracranial Subarachnoid Hemorrhage//Intracranial Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Intracranial



Expression Detail

GEO ID:GSE121868
Description:Profiles of Extracellular RNA in Cerebrospinal Fluid and Plasma from Subarachnoid Hemorrhage Patients
Experimental Design:Disease Sample Source
Case Disease Type:Subarachnoid Hemorrhage
Case Disease SubType:NA
Case Sample:Subarachnoid Hemorrhage
Control Sample:Blood Plasma
Number of Case:257
Number of Control:266
Number of Samples:523





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
CDC42SE1
chr1
151050971
151070325
-
MAML3
chr4
139716753
140154184
-
TUBA1C
chr12
49188736
49274603
+
RPL13A
chr19
49487554
49492308
+
MAP4K2
chr11
64784918
64803241
-
PTCD1
chr7
99416739
99466163
-
ATP5MF-PTCD1
chr7
99419749
99466197
-
HSPA8
chr11
123057489
123063230
-
GGA2
chr16
23463542
23521995
-
TUBA1A
chr12
49184795
49189080
-
TMEM216
chr11
61392360
61398863
+
YLPM1
chr14
74763316
74859435
+
AMOT
chrX
112774503
112840815
-
IGF2
chr11
2129112
2141238
-
PLS1
chr3
142596393
142713664
+
DECR2
chr16
401858
412487
+
TPI1
chr12
6867119
6870948
+
RNF7
chr3
141738249
141747560
+
ENO1
chr1
8861000
8879190
-
RTN3
chr11
63681446
63759891
+
MYL12B
chr18
3261479
3278431
+
B2M
chr15
44711487
44718877
+
LRIG2
chr1
113073198
113132260
+
CKAP5
chr11
46743048
46846308
-
RPS24
chr10
78033760
78056813
+
GOT2
chr16
58707131
58734342
-
HIPK3
chr11
33256672
33357023
+
FTL
chr19
48965309
48966879
+
LCP1
chr13
46125920
46211871
-
NACA2
chr17
61590421
61591219
-
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-93-5p
chr7
100093815
100093837
-
hsa-miR-145-5p
chr5
149430661
149430683
+
hsa-miR-526b-5p
chr19
53694406
53694428
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC020916.1
chr19
13823880
13842928
-
AC132217.1
chr11
2129121
2129964
-
SNHG1
chr11
62851984
62855953
-
Display:



Experiment Detail

GEO ID:GSE121868
Sample Source:Blood
Source Fraction:Plasma
Platform:GPL11154
Method:NGS
Num of detected RNA Type:5
Num of detected RNAs of this Type:17671
Sample treatment protocol:NA
RNA Extract protocol:total RNA RNA was isolated using MiRVana Paris (Ambion).
RNA library preparation protocol:TruSeq Small RNA library prep kit (Illumina) was used. Samples were not multiplexed. Strand specificity is non-stranded. Type of starting material is total RNA.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA