Entry Detail



General Information

Database ID:exR0208922
RNA Name:ACSF3
RNA Type:mRNA
Chromosome:chr16
Starnd:+
Coordinate:
Start Site(bp):89088375End Site(bp):89164121
External Links:ENSG00000176715



Disease Information

Disease Name:Subarachnoid Hemorrhage
Disease Category:Nervous System Diseases
MeSH ID:D013345
Type:Diseases Category/Nervous System Diseases
Alias:SAH (Subarachnoid Hemorrhage)//SAHs (Subarachnoid Hemorrhage)//Hemorrhage, Subarachnoid//Hemorrhages, Subarachnoid//Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Aneurysmal//Aneurysmal Subarachnoid Hemorrhage//Aneurysmal Subarachnoid Hemorrhages//Hemorrhage, Aneurysmal Subarachnoid//Hemorrhages, Aneurysmal Subarachnoid//Subarachnoid Hemorrhages, Aneurysmal//Subarachnoid Hemorrhage, Spontaneous//Hemorrhage, Spontaneous Subarachnoid//Hemorrhages, Spontaneous Subarachnoid//Spontaneous Subarachnoid Hemorrhage//Spontaneous Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Spontaneous//Perinatal Subarachnoid Hemorrhage//Hemorrhage, Perinatal Subarachnoid//Hemorrhages, Perinatal Subarachnoid//Perinatal Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Perinatal//Subarachnoid Hemorrhages, Perinatal//Subarachnoid Hemorrhage, Intracranial//Hemorrhage, Intracranial Subarachnoid//Hemorrhages, Intracranial Subarachnoid//Intracranial Subarachnoid Hemorrhage//Intracranial Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Intracranial



Expression Detail

GEO ID:GSE121868
Description:Profiles of Extracellular RNA in Cerebrospinal Fluid and Plasma from Subarachnoid Hemorrhage Patients
Experimental Design:Disease Sample Source
Case Disease Type:Subarachnoid Hemorrhage
Case Disease SubType:NA
Case Sample:Subarachnoid Hemorrhage
Control Sample:Blood Plasma
Number of Case:257
Number of Control:266
Number of Samples:523





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
REXO1
chr19
1815248
1848483
-
PBX1
chr1
164555584
164899296
+
RBFOX2
chr22
35738736
36028824
-
FAM193B
chr5
177519789
177554563
-
SLC47A1
chr17
19495385
19579034
+
ATG2A
chr11
64894546
64917211
-
TP63
chr3
189631389
189897276
+
ARID1A
chr1
26693236
26782104
+
SBNO2
chr19
1107637
1174268
-
AKT2
chr19
40230317
40285536
-
LRRC14
chr8
144517992
144525172
+
DGKD
chr2
233354507
233472104
+
SATB1
chr3
18345377
18445588
-
DCTD
chr4
182890060
182917936
-
NHSL1
chr6
138422043
138692571
-
SOX4
chr6
21593751
21598619
+
ZNF227
chr19
44207547
44237268
+
FAM189B
chr1
155247205
155255483
-
PAK4
chr19
39125770
39182816
+
SNRPB
chr20
2461634
2470853
-
RPL18A
chr19
17859910
17864153
+
NDUFV2
chr18
9102630
9134345
+
ABR
chr17
1003518
1229738
-
TANGO2
chr22
20017014
20067164
+
BPTF
chr17
67825503
67984378
+
UBA52
chr19
18571730
18577550
+
SYAP1
chrX
16719612
16765340
+
ADAR
chr1
154582057
154628013
-
TXNL1
chr18
56597209
56651600
-
NUP153
chr6
17615035
17706834
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AP005263.1
chr18
9102736
9254346
+
XIST
chrX
73820649
73852723
-
Display:



Experiment Detail

GEO ID:GSE121868
Sample Source:Blood
Source Fraction:Plasma
Platform:GPL11154
Method:NGS
Num of detected RNA Type:5
Num of detected RNAs of this Type:17671
Sample treatment protocol:NA
RNA Extract protocol:total RNA RNA was isolated using MiRVana Paris (Ambion).
RNA library preparation protocol:TruSeq Small RNA library prep kit (Illumina) was used. Samples were not multiplexed. Strand specificity is non-stranded. Type of starting material is total RNA.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA