Entry Detail



General Information

Database ID:exR0208936
RNA Name:ACTA1
RNA Type:mRNA
Chromosome:chr1
Starnd:-
Coordinate:
Start Site(bp):229431245End Site(bp):229434098
External Links:ENSG00000143632



Disease Information

Disease Name:Subarachnoid Hemorrhage
Disease Category:Nervous System Diseases
MeSH ID:D013345
Type:Diseases Category/Nervous System Diseases
Alias:SAH (Subarachnoid Hemorrhage)//SAHs (Subarachnoid Hemorrhage)//Hemorrhage, Subarachnoid//Hemorrhages, Subarachnoid//Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Aneurysmal//Aneurysmal Subarachnoid Hemorrhage//Aneurysmal Subarachnoid Hemorrhages//Hemorrhage, Aneurysmal Subarachnoid//Hemorrhages, Aneurysmal Subarachnoid//Subarachnoid Hemorrhages, Aneurysmal//Subarachnoid Hemorrhage, Spontaneous//Hemorrhage, Spontaneous Subarachnoid//Hemorrhages, Spontaneous Subarachnoid//Spontaneous Subarachnoid Hemorrhage//Spontaneous Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Spontaneous//Perinatal Subarachnoid Hemorrhage//Hemorrhage, Perinatal Subarachnoid//Hemorrhages, Perinatal Subarachnoid//Perinatal Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Perinatal//Subarachnoid Hemorrhages, Perinatal//Subarachnoid Hemorrhage, Intracranial//Hemorrhage, Intracranial Subarachnoid//Hemorrhages, Intracranial Subarachnoid//Intracranial Subarachnoid Hemorrhage//Intracranial Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Intracranial



Expression Detail

GEO ID:GSE121868
Description:Profiles of Extracellular RNA in Cerebrospinal Fluid and Plasma from Subarachnoid Hemorrhage Patients
Experimental Design:Disease Sample Source
Case Disease Type:Subarachnoid Hemorrhage
Case Disease SubType:NA
Case Sample:Subarachnoid Hemorrhage
Control Sample:Blood Plasma
Number of Case:257
Number of Control:266
Number of Samples:523





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
PRMT2
chr21
46635595
46665124
+
ACTR1B
chr2
97655939
97664044
-
SLC38A10
chr17
81244811
81295547
-
SNRPB2
chr20
16729961
16742564
+
AL136454.1
chr1
192716132
192716653
+
TARDBP
chr1
11012344
11026420
+
EIF5A
chr17
7306999
7312463
+
ATP5PD
chr17
75038863
75046985
-
LIX1L
chr1
145933423
145958017
-
SLC25A3
chr12
98593591
98606379
+
FTL
chr19
48965309
48966879
+
RPL28
chr19
55385345
55403250
+
POTEJ
chr2
130611481
130658091
+
AGGF1
chr5
77029251
77065234
+
MCM2
chr3
127598410
127622436
+
ERGIC3
chr20
35542021
35557634
+
HEXA
chr15
72340919
72376476
-
UBE4B
chr1
10032832
10181239
+
ACTC1
chr15
34790230
34795549
-
RPL23
chr17
38847860
38853764
-
SEC61G
chr7
54752250
54759974
-
MRPS27
chr5
72219409
72320646
-
RPL11
chr1
23691742
23696835
+
RNPEP
chr1
201982372
202006147
+
PFN1
chr17
4945652
4949061
-
PPIA
chr7
44796680
44824564
+
RPL36
chr19
5674947
5691875
+
POLR3C
chr1
145824088
145844402
+
TNIP1
chr5
151029945
151093577
-
CDC42SE1
chr1
151050971
151070325
-
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-4426
chr1
192716333
192716349
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AL022311.1
chr22
37876148
37895563
+
AL355472.2
chr1
234357006
234365828
+
AL359924.1
chr1
237862175
237928321
+
LINC00847
chr5
180830326
180839742
+
Display:



Experiment Detail

GEO ID:GSE121868
Sample Source:Blood
Source Fraction:Plasma
Platform:GPL11154
Method:NGS
Num of detected RNA Type:5
Num of detected RNAs of this Type:17671
Sample treatment protocol:NA
RNA Extract protocol:total RNA RNA was isolated using MiRVana Paris (Ambion).
RNA library preparation protocol:TruSeq Small RNA library prep kit (Illumina) was used. Samples were not multiplexed. Strand specificity is non-stranded. Type of starting material is total RNA.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA