Entry Detail



General Information

Database ID:exR0208937
RNA Name:ACTA2
RNA Type:mRNA
Chromosome:chr10
Starnd:-
Coordinate:
Start Site(bp):88935074End Site(bp):88991339
External Links:ENSG00000107796



Disease Information

Disease Name:Subarachnoid Hemorrhage
Disease Category:Nervous System Diseases
MeSH ID:D013345
Type:Diseases Category/Nervous System Diseases
Alias:SAH (Subarachnoid Hemorrhage)//SAHs (Subarachnoid Hemorrhage)//Hemorrhage, Subarachnoid//Hemorrhages, Subarachnoid//Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Aneurysmal//Aneurysmal Subarachnoid Hemorrhage//Aneurysmal Subarachnoid Hemorrhages//Hemorrhage, Aneurysmal Subarachnoid//Hemorrhages, Aneurysmal Subarachnoid//Subarachnoid Hemorrhages, Aneurysmal//Subarachnoid Hemorrhage, Spontaneous//Hemorrhage, Spontaneous Subarachnoid//Hemorrhages, Spontaneous Subarachnoid//Spontaneous Subarachnoid Hemorrhage//Spontaneous Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Spontaneous//Perinatal Subarachnoid Hemorrhage//Hemorrhage, Perinatal Subarachnoid//Hemorrhages, Perinatal Subarachnoid//Perinatal Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Perinatal//Subarachnoid Hemorrhages, Perinatal//Subarachnoid Hemorrhage, Intracranial//Hemorrhage, Intracranial Subarachnoid//Hemorrhages, Intracranial Subarachnoid//Intracranial Subarachnoid Hemorrhage//Intracranial Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Intracranial



Expression Detail

GEO ID:GSE121868
Description:Profiles of Extracellular RNA in Cerebrospinal Fluid and Plasma from Subarachnoid Hemorrhage Patients
Experimental Design:Disease Sample Source
Case Disease Type:Subarachnoid Hemorrhage
Case Disease SubType:NA
Case Sample:Subarachnoid Hemorrhage
Control Sample:Blood Plasma
Number of Case:257
Number of Control:266
Number of Samples:523





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ZNF516
chr18
76357682
76495242
-
HNRNPDL
chr4
82422564
82430408
-
RPS16
chr19
39433137
39435949
-
HLA-B
chr6
31269491
31357188
-
ATP5F1B
chr12
56638175
56645984
-
TMSB4X
chrX
12975110
12977227
+
HLA-A
chr6
29941260
29945884
+
POTEF
chr2
130073535
130129222
-
GCN1
chr12
120127202
120194715
-
HNRNPH3
chr10
68331174
68343191
+
TRAP1
chr16
3651639
3717553
-
ATP5PB
chr1
111448864
111462773
+
PWWP2B
chr10
132397168
132417859
+
PHF23
chr17
7235029
7239722
-
HLA-DMA
chr6
32948613
32969094
-
RPS8
chr1
44775251
44778779
+
PEX2
chr8
76980258
77001044
-
BAIAP2L1
chr7
98291650
98401090
-
CLUH
chr17
2689386
2712663
-
UQCRC1
chr3
48599002
48610976
-
CCT7
chr2
73233420
73253021
+
HLA-DQA1
chr6
32628179
32647062
+
ACTG1
chr17
81509971
81523847
-
CNBP
chr3
129169484
129183922
-
PTTG1
chr5
160421855
160428739
+
ATN1
chr12
6924463
6942321
+
DDIT4
chr10
72273924
72276036
+
POLN
chr4
2071918
2242121
-
RAB12
chr18
8609437
8639382
+
RARA
chr17
40309180
40357643
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC139149.1
chr17
81514047
81527776
+
AC013269.1
chr2
130530275
130537182
+
MALAT1
chr11
65497688
65506516
+
NEAT1
chr11
65422774
65445540
+
Display:



Experiment Detail

GEO ID:GSE121868
Sample Source:Blood
Source Fraction:Plasma
Platform:GPL11154
Method:NGS
Num of detected RNA Type:5
Num of detected RNAs of this Type:17671
Sample treatment protocol:NA
RNA Extract protocol:total RNA RNA was isolated using MiRVana Paris (Ambion).
RNA library preparation protocol:TruSeq Small RNA library prep kit (Illumina) was used. Samples were not multiplexed. Strand specificity is non-stranded. Type of starting material is total RNA.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA