Entry Detail



General Information

Database ID:exR0208940
RNA Name:ACTC1
RNA Type:mRNA
Chromosome:chr15
Starnd:-
Coordinate:
Start Site(bp):34790230End Site(bp):34795549
External Links:ENSG00000159251



Disease Information

Disease Name:Subarachnoid Hemorrhage
Disease Category:Nervous System Diseases
MeSH ID:D013345
Type:Diseases Category/Nervous System Diseases
Alias:SAH (Subarachnoid Hemorrhage)//SAHs (Subarachnoid Hemorrhage)//Hemorrhage, Subarachnoid//Hemorrhages, Subarachnoid//Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Aneurysmal//Aneurysmal Subarachnoid Hemorrhage//Aneurysmal Subarachnoid Hemorrhages//Hemorrhage, Aneurysmal Subarachnoid//Hemorrhages, Aneurysmal Subarachnoid//Subarachnoid Hemorrhages, Aneurysmal//Subarachnoid Hemorrhage, Spontaneous//Hemorrhage, Spontaneous Subarachnoid//Hemorrhages, Spontaneous Subarachnoid//Spontaneous Subarachnoid Hemorrhage//Spontaneous Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Spontaneous//Perinatal Subarachnoid Hemorrhage//Hemorrhage, Perinatal Subarachnoid//Hemorrhages, Perinatal Subarachnoid//Perinatal Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Perinatal//Subarachnoid Hemorrhages, Perinatal//Subarachnoid Hemorrhage, Intracranial//Hemorrhage, Intracranial Subarachnoid//Hemorrhages, Intracranial Subarachnoid//Intracranial Subarachnoid Hemorrhage//Intracranial Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Intracranial



Expression Detail

GEO ID:GSE121868
Description:Profiles of Extracellular RNA in Cerebrospinal Fluid and Plasma from Subarachnoid Hemorrhage Patients
Experimental Design:Disease Sample Source
Case Disease Type:Subarachnoid Hemorrhage
Case Disease SubType:NA
Case Sample:Subarachnoid Hemorrhage
Control Sample:Blood Plasma
Number of Case:257
Number of Control:266
Number of Samples:523





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
SLC12A6
chr15
34229784
34338060
-
PRKDC
chr8
47773111
47960178
-
POTEI
chr2
130459455
130509707
-
VAT1
chr17
43014607
43025123
-
IL16
chr15
81159575
81314058
+
PCNA
chr20
5114953
5126626
-
FAM185A
chr7
102748971
102809225
+
RPS17
chr15
82536750
82540459
-
EDC3
chr15
74630558
74696292
-
TBC1D9B
chr5
179862066
179907859
-
ZBTB45
chr19
58513530
58538911
-
B2M
chr15
44711487
44718877
+
EID1
chr15
48878134
48880173
+
ENO2
chr12
6913745
6923698
+
UBQLN4
chr1
156035299
156053798
-
ATP1A1
chr1
116372668
116410261
+
AP1G1
chr16
71729000
71809201
-
SNRPB
chr20
2461634
2470853
-
RPL26
chr17
8377516
8383213
-
G6PD
chrX
154531391
154547572
-
CAND1
chr12
67269358
67319953
+
TPI1
chr12
6867119
6870948
+
AC245033.1
chr15
82536788
82573194
-
ACTR1A
chr10
102461881
102502712
-
CASC4
chr15
44288719
44415758
+
ACTA1
chr1
229431245
229434098
-
SORL1
chr11
121452314
121633763
+
JTB
chr1
153974269
153977674
-
VPS51
chr11
65089324
65111862
+
SERF2
chr15
43777087
43802589
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC019205.1
chr6
73263212
73301789
+
AC105339.2
chr15
82752884
82757208
+
AC139149.1
chr17
81514047
81527776
+
AC012379.1
chr15
48783190
48784121
+
AC135178.2
chr17
8318088
8318712
-
AL359924.1
chr1
237862175
237928321
+
Display:



Experiment Detail

GEO ID:GSE121868
Sample Source:Blood
Source Fraction:Plasma
Platform:GPL11154
Method:NGS
Num of detected RNA Type:5
Num of detected RNAs of this Type:17671
Sample treatment protocol:NA
RNA Extract protocol:total RNA RNA was isolated using MiRVana Paris (Ambion).
RNA library preparation protocol:TruSeq Small RNA library prep kit (Illumina) was used. Samples were not multiplexed. Strand specificity is non-stranded. Type of starting material is total RNA.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA