Entry Detail



General Information

Database ID:exR0208960
RNA Name:ACTR6
RNA Type:mRNA
Chromosome:chr12
Starnd:+
Coordinate:
Start Site(bp):100199122End Site(bp):100241865
External Links:ENSG00000075089



Disease Information

Disease Name:Subarachnoid Hemorrhage
Disease Category:Nervous System Diseases
MeSH ID:D013345
Type:Diseases Category/Nervous System Diseases
Alias:SAH (Subarachnoid Hemorrhage)//SAHs (Subarachnoid Hemorrhage)//Hemorrhage, Subarachnoid//Hemorrhages, Subarachnoid//Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Aneurysmal//Aneurysmal Subarachnoid Hemorrhage//Aneurysmal Subarachnoid Hemorrhages//Hemorrhage, Aneurysmal Subarachnoid//Hemorrhages, Aneurysmal Subarachnoid//Subarachnoid Hemorrhages, Aneurysmal//Subarachnoid Hemorrhage, Spontaneous//Hemorrhage, Spontaneous Subarachnoid//Hemorrhages, Spontaneous Subarachnoid//Spontaneous Subarachnoid Hemorrhage//Spontaneous Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Spontaneous//Perinatal Subarachnoid Hemorrhage//Hemorrhage, Perinatal Subarachnoid//Hemorrhages, Perinatal Subarachnoid//Perinatal Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Perinatal//Subarachnoid Hemorrhages, Perinatal//Subarachnoid Hemorrhage, Intracranial//Hemorrhage, Intracranial Subarachnoid//Hemorrhages, Intracranial Subarachnoid//Intracranial Subarachnoid Hemorrhage//Intracranial Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Intracranial



Expression Detail

GEO ID:GSE121868
Description:Profiles of Extracellular RNA in Cerebrospinal Fluid and Plasma from Subarachnoid Hemorrhage Patients
Experimental Design:Disease Sample Source
Case Disease Type:Subarachnoid Hemorrhage
Case Disease SubType:NA
Case Sample:Subarachnoid Hemorrhage
Control Sample:Blood Plasma
Number of Case:257
Number of Control:266
Number of Samples:523





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ANKFY1
chr17
4163821
4263995
-
DDX24
chr14
94048287
94081212
-
AP002990.1
chr11
62559603
62591531
-
CD52
chr1
26317958
26320523
+
HNRNPC
chr14
21209136
21269494
-
RPS23
chr5
82273320
82278396
-
NAGK
chr2
71064344
71079808
+
EEF1G
chr11
62559596
62574086
-
RPL13
chr16
89560657
89566828
+
IGF2
chr11
2129112
2141238
-
UBE2D3
chr4
102794383
102868896
-
CD81
chr11
2376177
2397419
+
VSIG10
chr12
118063593
118136026
-
TMEM123
chr11
102396332
102470384
-
ACTB
chr7
5527148
5563784
-
GYG2
chrX
2828822
2882820
+
RAB35
chr12
120095099
120117502
-
NSUN5
chr7
73302516
73308826
-
HLA-C
chr6
31268749
31272130
-
ATP6AP2
chrX
40579372
40606848
+
FTH1
chr11
61959718
61967634
-
MTRNR2L12
chr3
96617188
96618236
-
ADH5
chr4
99070978
99088801
-
CLEC2D
chr12
9664969
9699553
+
NONO
chrX
71283192
71301168
+
RPS7
chr2
3575260
3580920
+
ZNF90
chr19
20077994
20127076
+
SLAMF1
chr1
160608106
160647295
-
ST8SIA1
chr12
22063773
22437041
-
YIPF3
chr6
43511832
43516985
-
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-6747-3p
chr11
62567011
62567031
-
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
LINC02539
chr6
137730170
137792835
-
Display:



Experiment Detail

GEO ID:GSE121868
Sample Source:Blood
Source Fraction:Plasma
Platform:GPL11154
Method:NGS
Num of detected RNA Type:5
Num of detected RNAs of this Type:17671
Sample treatment protocol:NA
RNA Extract protocol:total RNA RNA was isolated using MiRVana Paris (Ambion).
RNA library preparation protocol:TruSeq Small RNA library prep kit (Illumina) was used. Samples were not multiplexed. Strand specificity is non-stranded. Type of starting material is total RNA.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA