Entry Detail



General Information

Database ID:exR0208967
RNA Name:ACVR2B
RNA Type:mRNA
Chromosome:chr3
Starnd:+
Coordinate:
Start Site(bp):38453890End Site(bp):38493142
External Links:ENSG00000114739



Disease Information

Disease Name:Subarachnoid Hemorrhage
Disease Category:Nervous System Diseases
MeSH ID:D013345
Type:Diseases Category/Nervous System Diseases
Alias:SAH (Subarachnoid Hemorrhage)//SAHs (Subarachnoid Hemorrhage)//Hemorrhage, Subarachnoid//Hemorrhages, Subarachnoid//Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Aneurysmal//Aneurysmal Subarachnoid Hemorrhage//Aneurysmal Subarachnoid Hemorrhages//Hemorrhage, Aneurysmal Subarachnoid//Hemorrhages, Aneurysmal Subarachnoid//Subarachnoid Hemorrhages, Aneurysmal//Subarachnoid Hemorrhage, Spontaneous//Hemorrhage, Spontaneous Subarachnoid//Hemorrhages, Spontaneous Subarachnoid//Spontaneous Subarachnoid Hemorrhage//Spontaneous Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Spontaneous//Perinatal Subarachnoid Hemorrhage//Hemorrhage, Perinatal Subarachnoid//Hemorrhages, Perinatal Subarachnoid//Perinatal Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Perinatal//Subarachnoid Hemorrhages, Perinatal//Subarachnoid Hemorrhage, Intracranial//Hemorrhage, Intracranial Subarachnoid//Hemorrhages, Intracranial Subarachnoid//Intracranial Subarachnoid Hemorrhage//Intracranial Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Intracranial



Expression Detail

GEO ID:GSE121868
Description:Profiles of Extracellular RNA in Cerebrospinal Fluid and Plasma from Subarachnoid Hemorrhage Patients
Experimental Design:Disease Sample Source
Case Disease Type:Subarachnoid Hemorrhage
Case Disease SubType:NA
Case Sample:Subarachnoid Hemorrhage
Control Sample:Blood Plasma
Number of Case:257
Number of Control:266
Number of Samples:523





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
SF3A3
chr1
37956975
37990075
-
LSM4
chr19
18306230
18323274
-
DDX17
chr22
38483438
38507660
-
MTCH1
chr6
36968141
36986298
-
BCL6
chr3
187721377
187745725
-
TCOF1
chr5
150357629
150400308
+
LZTS2
chr10
100996618
101007836
+
PACSIN2
chr22
42835412
43015149
-
CBY1
chr22
38656636
38673854
+
ZDBF2
chr2
206274663
206314427
+
UNC45A
chr15
90930180
90954093
+
FAM111B
chr11
59107185
59127412
+
UBE3B
chr12
109477402
109536705
+
DNAAF2
chr14
49625174
49635230
-
GPAM
chr10
112149865
112215377
-
CHRFAM7A
chr15
30357766
30393849
-
SORD
chr15
45023181
45077185
+
HSPA5
chr9
125234853
125241343
-
MT-CO3
chrMT
9207
9990
+
TBC1D15
chr12
71839707
71927248
+
MYO7A
chr11
77128246
77215241
+
TUBA1B
chr12
49127782
49131397
-
HNRNPAB
chr5
178204533
178211163
+
MRPL12
chr17
81703367
81707517
+
SNRPN
chr15
24823637
24978723
+
AL138752.2
chr9
37588413
38068687
-
NT5DC2
chr3
52524385
52535054
-
ISOC1
chr5
129094749
129114028
+
SLC25A17
chr22
40769630
40819399
-
CRMP1
chr4
5748084
5893086
-
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-221-3p
chrX
45746180
45746202
-
hsa-miR-423-5p
chr17
30117095
30117117
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC090948.2
chr3
16339308
16339871
+
AD000090.1
chr19
35557956
35581954
+
LINC01578
chr15
92819540
92899701
+
LINC02035
chr3
122886941
122892416
+
NEAT1
chr11
65422774
65445540
+
XIST
chrX
73820649
73852723
-
Display:



Experiment Detail

GEO ID:GSE121868
Sample Source:Blood
Source Fraction:Plasma
Platform:GPL11154
Method:NGS
Num of detected RNA Type:5
Num of detected RNAs of this Type:17671
Sample treatment protocol:NA
RNA Extract protocol:total RNA RNA was isolated using MiRVana Paris (Ambion).
RNA library preparation protocol:TruSeq Small RNA library prep kit (Illumina) was used. Samples were not multiplexed. Strand specificity is non-stranded. Type of starting material is total RNA.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA