Entry Detail



General Information

Database ID:exR0209093
RNA Name:AFF1
RNA Type:mRNA
Chromosome:chr4
Starnd:+
Coordinate:
Start Site(bp):86935002End Site(bp):87141054
External Links:ENSG00000172493



Disease Information

Disease Name:Subarachnoid Hemorrhage
Disease Category:Nervous System Diseases
MeSH ID:D013345
Type:Diseases Category/Nervous System Diseases
Alias:SAH (Subarachnoid Hemorrhage)//SAHs (Subarachnoid Hemorrhage)//Hemorrhage, Subarachnoid//Hemorrhages, Subarachnoid//Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Aneurysmal//Aneurysmal Subarachnoid Hemorrhage//Aneurysmal Subarachnoid Hemorrhages//Hemorrhage, Aneurysmal Subarachnoid//Hemorrhages, Aneurysmal Subarachnoid//Subarachnoid Hemorrhages, Aneurysmal//Subarachnoid Hemorrhage, Spontaneous//Hemorrhage, Spontaneous Subarachnoid//Hemorrhages, Spontaneous Subarachnoid//Spontaneous Subarachnoid Hemorrhage//Spontaneous Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Spontaneous//Perinatal Subarachnoid Hemorrhage//Hemorrhage, Perinatal Subarachnoid//Hemorrhages, Perinatal Subarachnoid//Perinatal Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Perinatal//Subarachnoid Hemorrhages, Perinatal//Subarachnoid Hemorrhage, Intracranial//Hemorrhage, Intracranial Subarachnoid//Hemorrhages, Intracranial Subarachnoid//Intracranial Subarachnoid Hemorrhage//Intracranial Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Intracranial



Expression Detail

GEO ID:GSE121868
Description:Profiles of Extracellular RNA in Cerebrospinal Fluid and Plasma from Subarachnoid Hemorrhage Patients
Experimental Design:Disease Sample Source
Case Disease Type:Subarachnoid Hemorrhage
Case Disease SubType:NA
Case Sample:Subarachnoid Hemorrhage
Control Sample:Blood Plasma
Number of Case:257
Number of Control:266
Number of Samples:523





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AP1G1
chr16
71729000
71809201
-
TMBIM6
chr12
49707725
49764934
+
UBALD2
chr17
76265348
76271298
+
KIF1C
chr17
4997950
5028401
+
ERAL1
chr17
28855010
28861061
+
HNRNPM
chr19
8444767
8489114
+
DUSP5
chr10
110497907
110511533
+
VPS13A
chr9
77177445
77421537
+
RAB5C
chr17
42124976
42155044
-
RAVER2
chr1
64745095
64833232
+
RSU1
chr10
16590611
16817463
-
DNAJC5
chr20
63895126
63936031
+
RHEB
chr7
151466012
151520120
-
TSR1
chr17
2322396
2336657
-
CHD8
chr14
21385194
21456126
-
UNC13D
chr17
75827225
75844717
-
MCM2
chr3
127598410
127622436
+
RANBP2
chr2
108719482
108785809
+
ACTG1
chr17
81509971
81523847
-
PRDX6
chr1
173477330
173488815
+
BAZ1B
chr7
73440406
73522293
-
ABI1
chr10
26746593
26861087
-
KRAS
chr12
25205246
25250936
-
STRBP
chr9
123109500
123268586
-
CC2D1A
chr19
13906201
13930879
+
COPS8
chr2
237085882
237100474
+
DEDD
chr1
161120974
161132688
-
SSRP1
chr11
57325986
57335892
-
CASP8
chr2
201233443
201287711
+
TMEM237
chr2
201620184
201643570
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC025181.2
chr5
32174471
32175272
+
MAPKAPK5-AS1
chr12
111839764
111842902
-
Display:



Experiment Detail

GEO ID:GSE121868
Sample Source:Blood
Source Fraction:Plasma
Platform:GPL11154
Method:NGS
Num of detected RNA Type:5
Num of detected RNAs of this Type:17671
Sample treatment protocol:NA
RNA Extract protocol:total RNA RNA was isolated using MiRVana Paris (Ambion).
RNA library preparation protocol:TruSeq Small RNA library prep kit (Illumina) was used. Samples were not multiplexed. Strand specificity is non-stranded. Type of starting material is total RNA.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA