Entry Detail



General Information

Database ID:exR0209097
RNA Name:AFG3L2
RNA Type:mRNA
Chromosome:chr18
Starnd:-
Coordinate:
Start Site(bp):12328944End Site(bp):12377227
External Links:ENSG00000141385



Disease Information

Disease Name:Subarachnoid Hemorrhage
Disease Category:Nervous System Diseases
MeSH ID:D013345
Type:Diseases Category/Nervous System Diseases
Alias:SAH (Subarachnoid Hemorrhage)//SAHs (Subarachnoid Hemorrhage)//Hemorrhage, Subarachnoid//Hemorrhages, Subarachnoid//Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Aneurysmal//Aneurysmal Subarachnoid Hemorrhage//Aneurysmal Subarachnoid Hemorrhages//Hemorrhage, Aneurysmal Subarachnoid//Hemorrhages, Aneurysmal Subarachnoid//Subarachnoid Hemorrhages, Aneurysmal//Subarachnoid Hemorrhage, Spontaneous//Hemorrhage, Spontaneous Subarachnoid//Hemorrhages, Spontaneous Subarachnoid//Spontaneous Subarachnoid Hemorrhage//Spontaneous Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Spontaneous//Perinatal Subarachnoid Hemorrhage//Hemorrhage, Perinatal Subarachnoid//Hemorrhages, Perinatal Subarachnoid//Perinatal Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Perinatal//Subarachnoid Hemorrhages, Perinatal//Subarachnoid Hemorrhage, Intracranial//Hemorrhage, Intracranial Subarachnoid//Hemorrhages, Intracranial Subarachnoid//Intracranial Subarachnoid Hemorrhage//Intracranial Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Intracranial



Expression Detail

GEO ID:GSE121868
Description:Profiles of Extracellular RNA in Cerebrospinal Fluid and Plasma from Subarachnoid Hemorrhage Patients
Experimental Design:Disease Sample Source
Case Disease Type:Subarachnoid Hemorrhage
Case Disease SubType:NA
Case Sample:Subarachnoid Hemorrhage
Control Sample:Blood Plasma
Number of Case:257
Number of Control:266
Number of Samples:523





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
RPS18
chr6
33272075
33276511
+
RPS23
chr5
82273320
82278396
-
SOX11
chr2
5692384
5701385
+
MT-CO2
chrMT
7586
8269
+
RPL3
chr22
39312882
39320389
-
N4BP2L2
chr13
32432417
32538885
-
CHMP5
chr9
33264879
33282070
+
PEAK1
chr15
77100656
77420144
-
PPP1CB
chr2
28751640
28802940
+
GDI2
chr10
5765223
5842132
-
PITX1
chr5
135027734
135034813
-
NUP107
chr12
68686951
68745809
+
DYNLL1
chr12
120469850
120498493
+
CAPN2
chr1
223701593
223776018
+
CSDE1
chr1
114716913
114758676
-
ALDOA
chr16
30064164
30070457
+
SLC41A1
chr1
205789094
205813748
-
TRAPPC1
chr17
7930345
7932123
-
ADH5
chr4
99070978
99088801
-
RPL35
chr9
124857880
124861981
-
LCP1
chr13
46125920
46211871
-
GAPDH
chr12
6534512
6538374
+
FLNA
chrX
154348524
154374638
-
BTG2
chr1
203305491
203309602
+
FASN
chr17
82078338
82098294
-
C17orf49
chr17
7014495
7017525
+
HK2
chr2
74834127
74893359
+
YBX1
chr1
42682418
42703805
+
THOC5
chr22
29505879
29555216
-
PTTG1IP
chr21
44849585
44873903
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC091564.7
chr11
6610883
6616594
-
AP001496.2
chr18
5232876
5238526
-
SNHG1
chr11
62851984
62855953
-
Display:



Experiment Detail

GEO ID:GSE121868
Sample Source:Blood
Source Fraction:Plasma
Platform:GPL11154
Method:NGS
Num of detected RNA Type:5
Num of detected RNAs of this Type:17671
Sample treatment protocol:NA
RNA Extract protocol:total RNA RNA was isolated using MiRVana Paris (Ambion).
RNA library preparation protocol:TruSeq Small RNA library prep kit (Illumina) was used. Samples were not multiplexed. Strand specificity is non-stranded. Type of starting material is total RNA.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA