Entry Detail



General Information

Database ID:exR0209099
RNA Name:AFMID
RNA Type:mRNA
Chromosome:chr17
Starnd:+
Coordinate:
Start Site(bp):78187317End Site(bp):78207701
External Links:ENSG00000183077



Disease Information

Disease Name:Subarachnoid Hemorrhage
Disease Category:Nervous System Diseases
MeSH ID:D013345
Type:Diseases Category/Nervous System Diseases
Alias:SAH (Subarachnoid Hemorrhage)//SAHs (Subarachnoid Hemorrhage)//Hemorrhage, Subarachnoid//Hemorrhages, Subarachnoid//Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Aneurysmal//Aneurysmal Subarachnoid Hemorrhage//Aneurysmal Subarachnoid Hemorrhages//Hemorrhage, Aneurysmal Subarachnoid//Hemorrhages, Aneurysmal Subarachnoid//Subarachnoid Hemorrhages, Aneurysmal//Subarachnoid Hemorrhage, Spontaneous//Hemorrhage, Spontaneous Subarachnoid//Hemorrhages, Spontaneous Subarachnoid//Spontaneous Subarachnoid Hemorrhage//Spontaneous Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Spontaneous//Perinatal Subarachnoid Hemorrhage//Hemorrhage, Perinatal Subarachnoid//Hemorrhages, Perinatal Subarachnoid//Perinatal Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Perinatal//Subarachnoid Hemorrhages, Perinatal//Subarachnoid Hemorrhage, Intracranial//Hemorrhage, Intracranial Subarachnoid//Hemorrhages, Intracranial Subarachnoid//Intracranial Subarachnoid Hemorrhage//Intracranial Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Intracranial



Expression Detail

GEO ID:GSE121868
Description:Profiles of Extracellular RNA in Cerebrospinal Fluid and Plasma from Subarachnoid Hemorrhage Patients
Experimental Design:Disease Sample Source
Case Disease Type:Subarachnoid Hemorrhage
Case Disease SubType:NA
Case Sample:Subarachnoid Hemorrhage
Control Sample:Blood Plasma
Number of Case:257
Number of Control:266
Number of Samples:523





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ALDOA
chr16
30064164
30070457
+
C8orf88
chr8
90958471
90985238
-
CCT7
chr2
73233420
73253021
+
CFL1
chr11
65823022
65862026
-
CNOT1
chr16
58519951
58629885
-
CRYBG2
chr1
26321698
26360080
-
CSRP2
chr12
76858709
76879023
-
EEF1D
chr8
143579697
143599541
-
FLNA
chrX
154348524
154374638
-
GTPBP3
chr19
17334920
17342731
+
HLA-DPB1
chr6
33075990
33089696
+
HOXD9
chr2
176122719
176124937
+
LMNB1
chr5
126776623
126837020
+
LPCAT1
chr5
1456480
1523962
-
MAP3K11
chr11
65597756
65615382
-
MYO1C
chr17
1464186
1492686
-
NCBP3
chr17
3802158
3846246
-
PCNP
chr3
101574180
101594465
+
PPIA
chr7
44796680
44824564
+
RANBP2
chr2
108719482
108785809
+
RBM5
chr3
50088919
50119021
+
SIPA1L1
chr14
71320449
71741229
+
SRA1
chr5
140537340
140558252
-
TLR7
chrX
12867072
12890361
+
UHRF1BP1
chr6
34792015
34883138
+
UQCRHL
chr1
15807169
15809348
-
USF2
chr19
35268962
35279821
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AL021707.3
chr22
38734730
38738990
+
RMRP
chr9
35657751
35658018
-
Display:



Experiment Detail

GEO ID:GSE121868
Sample Source:Blood
Source Fraction:Plasma
Platform:GPL11154
Method:NGS
Num of detected RNA Type:5
Num of detected RNAs of this Type:17671
Sample treatment protocol:NA
RNA Extract protocol:total RNA RNA was isolated using MiRVana Paris (Ambion).
RNA library preparation protocol:TruSeq Small RNA library prep kit (Illumina) was used. Samples were not multiplexed. Strand specificity is non-stranded. Type of starting material is total RNA.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA