Entry Detail



General Information

Database ID:exR0209100
RNA Name:AFTPH
RNA Type:mRNA
Chromosome:chr2
Starnd:+
Coordinate:
Start Site(bp):64524305End Site(bp):64593005
External Links:ENSG00000119844



Disease Information

Disease Name:Subarachnoid Hemorrhage
Disease Category:Nervous System Diseases
MeSH ID:D013345
Type:Diseases Category/Nervous System Diseases
Alias:SAH (Subarachnoid Hemorrhage)//SAHs (Subarachnoid Hemorrhage)//Hemorrhage, Subarachnoid//Hemorrhages, Subarachnoid//Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Aneurysmal//Aneurysmal Subarachnoid Hemorrhage//Aneurysmal Subarachnoid Hemorrhages//Hemorrhage, Aneurysmal Subarachnoid//Hemorrhages, Aneurysmal Subarachnoid//Subarachnoid Hemorrhages, Aneurysmal//Subarachnoid Hemorrhage, Spontaneous//Hemorrhage, Spontaneous Subarachnoid//Hemorrhages, Spontaneous Subarachnoid//Spontaneous Subarachnoid Hemorrhage//Spontaneous Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Spontaneous//Perinatal Subarachnoid Hemorrhage//Hemorrhage, Perinatal Subarachnoid//Hemorrhages, Perinatal Subarachnoid//Perinatal Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Perinatal//Subarachnoid Hemorrhages, Perinatal//Subarachnoid Hemorrhage, Intracranial//Hemorrhage, Intracranial Subarachnoid//Hemorrhages, Intracranial Subarachnoid//Intracranial Subarachnoid Hemorrhage//Intracranial Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Intracranial



Expression Detail

GEO ID:GSE121868
Description:Profiles of Extracellular RNA in Cerebrospinal Fluid and Plasma from Subarachnoid Hemorrhage Patients
Experimental Design:Disease Sample Source
Case Disease Type:Subarachnoid Hemorrhage
Case Disease SubType:NA
Case Sample:Subarachnoid Hemorrhage
Control Sample:Blood Plasma
Number of Case:257
Number of Control:266
Number of Samples:523





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
BID
chr22
17734138
17774770
-
YWHAQ
chr2
9583967
9630997
-
CLEC2D
chr12
9664969
9699553
+
NAP1L1
chr12
76036585
76084958
-
DTYMK
chr2
241675747
241686944
-
TWSG1
chr18
9334767
9402420
+
TUBA1B
chr12
49127782
49131397
-
LAMC1
chr1
183023420
183145592
+
BIRC2
chr11
102347211
102378670
+
CUL3
chr2
224470150
224585397
-
PGK1
chrX
77910739
78129295
+
HLA-A
chr6
29941260
29945884
+
HEXA
chr15
72340919
72376476
-
STRN4
chr19
46719511
46746994
-
RPUSD4
chr11
126202096
126211692
-
HLA-F
chr6
29722775
29738528
+
BRPF3
chr6
36196744
36232790
+
CD48
chr1
160678746
160711831
-
ATP5MG
chr11
118401606
118431496
+
LCP1
chr13
46125920
46211871
-
ATP8B2
chr1
154325553
154351304
+
NCL
chr2
231453531
231483641
-
AKIRIN2
chr6
87674860
87702233
-
HNRNPU
chr1
244840638
244864560
-
HDAC2
chr6
113933028
114011308
-
PHF20
chr20
35771974
35950370
+
RPL32
chr3
12834485
12841582
-
MRPL4
chr19
10251901
10260055
+
RPL27
chr17
42998273
43002959
+
YWHAH
chr22
31944522
31957603
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
LINC01405
chr12
110934590
110959093
+
Display:



Experiment Detail

GEO ID:GSE121868
Sample Source:Blood
Source Fraction:Plasma
Platform:GPL11154
Method:NGS
Num of detected RNA Type:5
Num of detected RNAs of this Type:17671
Sample treatment protocol:NA
RNA Extract protocol:total RNA RNA was isolated using MiRVana Paris (Ambion).
RNA library preparation protocol:TruSeq Small RNA library prep kit (Illumina) was used. Samples were not multiplexed. Strand specificity is non-stranded. Type of starting material is total RNA.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA