Entry Detail



General Information

Database ID:exR0209101
RNA Name:AGA
RNA Type:mRNA
Chromosome:chr4
Starnd:-
Coordinate:
Start Site(bp):177430774End Site(bp):177442437
External Links:ENSG00000038002



Disease Information

Disease Name:Subarachnoid Hemorrhage
Disease Category:Nervous System Diseases
MeSH ID:D013345
Type:Diseases Category/Nervous System Diseases
Alias:SAH (Subarachnoid Hemorrhage)//SAHs (Subarachnoid Hemorrhage)//Hemorrhage, Subarachnoid//Hemorrhages, Subarachnoid//Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Aneurysmal//Aneurysmal Subarachnoid Hemorrhage//Aneurysmal Subarachnoid Hemorrhages//Hemorrhage, Aneurysmal Subarachnoid//Hemorrhages, Aneurysmal Subarachnoid//Subarachnoid Hemorrhages, Aneurysmal//Subarachnoid Hemorrhage, Spontaneous//Hemorrhage, Spontaneous Subarachnoid//Hemorrhages, Spontaneous Subarachnoid//Spontaneous Subarachnoid Hemorrhage//Spontaneous Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Spontaneous//Perinatal Subarachnoid Hemorrhage//Hemorrhage, Perinatal Subarachnoid//Hemorrhages, Perinatal Subarachnoid//Perinatal Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Perinatal//Subarachnoid Hemorrhages, Perinatal//Subarachnoid Hemorrhage, Intracranial//Hemorrhage, Intracranial Subarachnoid//Hemorrhages, Intracranial Subarachnoid//Intracranial Subarachnoid Hemorrhage//Intracranial Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Intracranial



Expression Detail

GEO ID:GSE121868
Description:Profiles of Extracellular RNA in Cerebrospinal Fluid and Plasma from Subarachnoid Hemorrhage Patients
Experimental Design:Disease Sample Source
Case Disease Type:Subarachnoid Hemorrhage
Case Disease SubType:NA
Case Sample:Subarachnoid Hemorrhage
Control Sample:Blood Plasma
Number of Case:257
Number of Control:266
Number of Samples:523





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ANAPC4
chr4
25377213
25418498
+
ATP6V1H
chr8
53715543
53843558
-
BTF3
chr5
73498408
73505635
+
CAPN1
chr11
65180566
65212006
+
CAT
chr11
34438934
34472060
+
CCDC169
chr13
36222008
36297840
-
CCDC169-SOHLH2
chr13
36168794
36297842
-
CHD8
chr14
21385194
21456126
-
FADS2
chr11
61792980
61867354
+
FAM107B
chr10
14518557
14774897
-
MCM2
chr3
127598410
127622436
+
MRPL3
chr3
131462212
131502983
-
MTRNR2L12
chr3
96617188
96618236
-
PFN1
chr17
4945652
4949061
-
PPM1A
chr14
60245752
60299087
+
PTGES3
chr12
56663341
56688408
-
PUM3
chr9
2720469
2844095
-
RPL13A
chr19
49487554
49492308
+
RPL27A
chr11
8682788
8714759
+
RPL5
chr1
92832013
92841924
+
RPL8
chr8
144789765
144792587
-
RPS20
chr8
56067295
56074581
-
SPNS1
chr16
28974221
28984548
+
SRGN
chr10
69088103
69104805
+
TAF7
chr5
141260225
141320784
-
TMBIM6
chr12
49707725
49764934
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC109460.3
chr16
28974804
28990775
+
LOH12CR2
chr12
12355406
12357067
-
Display:



Experiment Detail

GEO ID:GSE121868
Sample Source:Blood
Source Fraction:Plasma
Platform:GPL11154
Method:NGS
Num of detected RNA Type:5
Num of detected RNAs of this Type:17671
Sample treatment protocol:NA
RNA Extract protocol:total RNA RNA was isolated using MiRVana Paris (Ambion).
RNA library preparation protocol:TruSeq Small RNA library prep kit (Illumina) was used. Samples were not multiplexed. Strand specificity is non-stranded. Type of starting material is total RNA.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA