Entry Detail



General Information

Database ID:exR0209116
RNA Name:AGFG2
RNA Type:mRNA
Chromosome:chr7
Starnd:+
Coordinate:
Start Site(bp):100539203End Site(bp):100568220
External Links:ENSG00000106351



Disease Information

Disease Name:Subarachnoid Hemorrhage
Disease Category:Nervous System Diseases
MeSH ID:D013345
Type:Diseases Category/Nervous System Diseases
Alias:SAH (Subarachnoid Hemorrhage)//SAHs (Subarachnoid Hemorrhage)//Hemorrhage, Subarachnoid//Hemorrhages, Subarachnoid//Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Aneurysmal//Aneurysmal Subarachnoid Hemorrhage//Aneurysmal Subarachnoid Hemorrhages//Hemorrhage, Aneurysmal Subarachnoid//Hemorrhages, Aneurysmal Subarachnoid//Subarachnoid Hemorrhages, Aneurysmal//Subarachnoid Hemorrhage, Spontaneous//Hemorrhage, Spontaneous Subarachnoid//Hemorrhages, Spontaneous Subarachnoid//Spontaneous Subarachnoid Hemorrhage//Spontaneous Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Spontaneous//Perinatal Subarachnoid Hemorrhage//Hemorrhage, Perinatal Subarachnoid//Hemorrhages, Perinatal Subarachnoid//Perinatal Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Perinatal//Subarachnoid Hemorrhages, Perinatal//Subarachnoid Hemorrhage, Intracranial//Hemorrhage, Intracranial Subarachnoid//Hemorrhages, Intracranial Subarachnoid//Intracranial Subarachnoid Hemorrhage//Intracranial Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Intracranial



Expression Detail

GEO ID:GSE121868
Description:Profiles of Extracellular RNA in Cerebrospinal Fluid and Plasma from Subarachnoid Hemorrhage Patients
Experimental Design:Disease Sample Source
Case Disease Type:Subarachnoid Hemorrhage
Case Disease SubType:NA
Case Sample:Subarachnoid Hemorrhage
Control Sample:Blood Plasma
Number of Case:257
Number of Control:266
Number of Samples:523





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
HK1
chr10
69269984
69401884
+
DUSP2
chr2
96143169
96145440
-
HMGA1
chr6
34236873
34246231
+
ADCY3
chr2
24819169
24919839
-
BLCAP
chr20
37492472
37527931
-
KCNQ5
chr6
72621792
73198851
+
LASP1
chr17
38869859
38921770
+
RPS5
chr19
58386400
58394806
+
CORO1B
chr11
67435510
67443821
-
RBM42
chr19
35629030
35637686
+
DDX5
chr17
64498254
64508199
-
RPS19
chr19
41860255
41872925
+
REEP5
chr5
112876385
112922289
-
HLA-A
chr6
29941260
29945884
+
VPS4A
chr16
69311350
69326939
+
SLC12A8
chr3
125082636
125212864
-
ZFP36L1
chr14
68787660
68796253
-
HLA-E
chr6
30489509
30494194
+
ARID3A
chr19
925781
975939
+
RPL13
chr16
89560657
89566828
+
PTPRCAP
chr11
67435510
67437682
-
SOX13
chr1
204073115
204127743
+
NMT1
chr17
45051610
45109016
+
CRKL
chr22
20917407
20953747
+
INAFM2
chr15
40323692
40326715
+
CDK1
chr10
60778331
60794852
+
TUBA1B
chr12
49127782
49131397
-
BASP1
chr5
17065598
17276843
+
TMEM54
chr1
32894594
32901438
-
TPT1
chr13
45333471
45341370
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC009065.3
chr16
2091436
2095433
+
TMEM147-AS1
chr19
35540738
35546029
-
XIST
chrX
73820649
73852723
-
Display:



Experiment Detail

GEO ID:GSE121868
Sample Source:Blood
Source Fraction:Plasma
Platform:GPL11154
Method:NGS
Num of detected RNA Type:5
Num of detected RNAs of this Type:17671
Sample treatment protocol:NA
RNA Extract protocol:total RNA RNA was isolated using MiRVana Paris (Ambion).
RNA library preparation protocol:TruSeq Small RNA library prep kit (Illumina) was used. Samples were not multiplexed. Strand specificity is non-stranded. Type of starting material is total RNA.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA