Entry Detail



General Information

Database ID:exR0209117
RNA Name:AGGF1
RNA Type:mRNA
Chromosome:chr5
Starnd:+
Coordinate:
Start Site(bp):77029251End Site(bp):77065234
External Links:ENSG00000164252



Disease Information

Disease Name:Subarachnoid Hemorrhage
Disease Category:Nervous System Diseases
MeSH ID:D013345
Type:Diseases Category/Nervous System Diseases
Alias:SAH (Subarachnoid Hemorrhage)//SAHs (Subarachnoid Hemorrhage)//Hemorrhage, Subarachnoid//Hemorrhages, Subarachnoid//Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Aneurysmal//Aneurysmal Subarachnoid Hemorrhage//Aneurysmal Subarachnoid Hemorrhages//Hemorrhage, Aneurysmal Subarachnoid//Hemorrhages, Aneurysmal Subarachnoid//Subarachnoid Hemorrhages, Aneurysmal//Subarachnoid Hemorrhage, Spontaneous//Hemorrhage, Spontaneous Subarachnoid//Hemorrhages, Spontaneous Subarachnoid//Spontaneous Subarachnoid Hemorrhage//Spontaneous Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Spontaneous//Perinatal Subarachnoid Hemorrhage//Hemorrhage, Perinatal Subarachnoid//Hemorrhages, Perinatal Subarachnoid//Perinatal Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Perinatal//Subarachnoid Hemorrhages, Perinatal//Subarachnoid Hemorrhage, Intracranial//Hemorrhage, Intracranial Subarachnoid//Hemorrhages, Intracranial Subarachnoid//Intracranial Subarachnoid Hemorrhage//Intracranial Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Intracranial



Expression Detail

GEO ID:GSE121868
Description:Profiles of Extracellular RNA in Cerebrospinal Fluid and Plasma from Subarachnoid Hemorrhage Patients
Experimental Design:Disease Sample Source
Case Disease Type:Subarachnoid Hemorrhage
Case Disease SubType:NA
Case Sample:Subarachnoid Hemorrhage
Control Sample:Blood Plasma
Number of Case:257
Number of Control:266
Number of Samples:523





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ASPM
chr1
197084127
197146694
-
RPL27A
chr11
8682788
8714759
+
PGK1
chrX
77910739
78129295
+
TUBA1B
chr12
49127782
49131397
-
EIF5A
chr17
7306999
7312463
+
FP565260.6
chr21
5155499
5165472
-
MYL6
chr12
56158161
56163496
+
FP565260.2
chr21
5116343
5133805
-
ESRP1
chr8
94641074
94707466
+
SUB1
chr5
32531633
32604079
+
BZW2
chr7
16646131
16706523
+
ACTA1
chr1
229431245
229434098
-
B2M
chr15
44711487
44718877
+
NEDD4L
chr18
58044226
58401540
+
HLA-A
chr6
29941260
29945884
+
MARCKSL1
chr1
32333839
32336233
-
RPS9
chr19
54200809
54249003
+
AC008581.2
chr5
77030902
77152155
+
KIFC3
chr16
57758217
57863053
-
SMC4
chr3
160399274
160434954
+
PRRC1
chr5
127517609
127555089
+
TCEAL4
chrX
103576231
103587736
+
PPP2R5B
chr11
64917553
64934475
+
ERAL1
chr17
28855010
28861061
+
PBX1
chr1
164555584
164899296
+
ID1
chr20
31605283
31606515
+
CCPG1
chr15
55340032
55408510
-
RPL23A
chr17
28719985
28724359
+
ACTN1
chr14
68874143
68979440
-
MIF
chr22
23894383
23895227
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
FGD5-AS1
chr3
14920347
14948424
-
Display:



Experiment Detail

GEO ID:GSE121868
Sample Source:Blood
Source Fraction:Plasma
Platform:GPL11154
Method:NGS
Num of detected RNA Type:5
Num of detected RNAs of this Type:17671
Sample treatment protocol:NA
RNA Extract protocol:total RNA RNA was isolated using MiRVana Paris (Ambion).
RNA library preparation protocol:TruSeq Small RNA library prep kit (Illumina) was used. Samples were not multiplexed. Strand specificity is non-stranded. Type of starting material is total RNA.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA