Entry Detail



General Information

Database ID:exR0209118
RNA Name:AGK
RNA Type:mRNA
Chromosome:chr7
Starnd:+
Coordinate:
Start Site(bp):141551278End Site(bp):141655244
External Links:ENSG00000006530



Disease Information

Disease Name:Subarachnoid Hemorrhage
Disease Category:Nervous System Diseases
MeSH ID:D013345
Type:Diseases Category/Nervous System Diseases
Alias:SAH (Subarachnoid Hemorrhage)//SAHs (Subarachnoid Hemorrhage)//Hemorrhage, Subarachnoid//Hemorrhages, Subarachnoid//Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Aneurysmal//Aneurysmal Subarachnoid Hemorrhage//Aneurysmal Subarachnoid Hemorrhages//Hemorrhage, Aneurysmal Subarachnoid//Hemorrhages, Aneurysmal Subarachnoid//Subarachnoid Hemorrhages, Aneurysmal//Subarachnoid Hemorrhage, Spontaneous//Hemorrhage, Spontaneous Subarachnoid//Hemorrhages, Spontaneous Subarachnoid//Spontaneous Subarachnoid Hemorrhage//Spontaneous Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Spontaneous//Perinatal Subarachnoid Hemorrhage//Hemorrhage, Perinatal Subarachnoid//Hemorrhages, Perinatal Subarachnoid//Perinatal Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Perinatal//Subarachnoid Hemorrhages, Perinatal//Subarachnoid Hemorrhage, Intracranial//Hemorrhage, Intracranial Subarachnoid//Hemorrhages, Intracranial Subarachnoid//Intracranial Subarachnoid Hemorrhage//Intracranial Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Intracranial



Expression Detail

GEO ID:GSE121868
Description:Profiles of Extracellular RNA in Cerebrospinal Fluid and Plasma from Subarachnoid Hemorrhage Patients
Experimental Design:Disease Sample Source
Case Disease Type:Subarachnoid Hemorrhage
Case Disease SubType:NA
Case Sample:Subarachnoid Hemorrhage
Control Sample:Blood Plasma
Number of Case:257
Number of Control:266
Number of Samples:523





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
EXOSC6
chr16
70246778
70251940
-
AL138752.2
chr9
37588413
38068687
-
TUBA1C
chr12
49188736
49274603
+
TOMM5
chr9
37582646
37592604
-
RTN3
chr11
63681446
63759891
+
LSS
chr21
46188141
46228824
-
SESN3
chr11
95165513
95232541
-
RPAP2
chr1
92299059
92402056
+
CBX5
chr12
54230942
54280133
-
TAF10
chr11
6606294
6612539
-
ID2
chr2
8678845
8684461
+
ZCCHC17
chr1
31296982
31364953
+
RBM5
chr3
50088919
50119021
+
ZNF426
chr19
9523223
9538645
-
ITGAL
chr16
30472719
30523185
+
KDM1A
chr1
23019443
23083689
+
ITGB5
chr3
124761948
124901418
-
ARIH2
chr3
48918821
48986382
+
PUF60
chr8
143816344
143829352
-
GALC
chr14
87837820
87993665
-
AL513165.2
chr9
37512547
37592469
-
PSMA2
chr7
42916861
42932185
-
LGR4
chr11
27365961
27472790
-
C5orf38
chr5
2752131
2755397
+
ABI1
chr10
26746593
26861087
-
AC010132.3
chr7
42909273
42932174
-
LSM4
chr19
18306230
18323274
-
FBXO21
chr12
117141988
117190531
-
MRPL15
chr8
54135241
54148514
+
HNRNPL
chr19
38836388
38852347
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC097634.1
chr3
71584943
71587409
+
GUSBP11
chr22
23638487
23717356
-
PURPL
chr5
27217714
27496994
+
SNHG1
chr11
62851984
62855953
-
XIST
chrX
73820649
73852723
-
Display:



Experiment Detail

GEO ID:GSE121868
Sample Source:Blood
Source Fraction:Plasma
Platform:GPL11154
Method:NGS
Num of detected RNA Type:5
Num of detected RNAs of this Type:17671
Sample treatment protocol:NA
RNA Extract protocol:total RNA RNA was isolated using MiRVana Paris (Ambion).
RNA library preparation protocol:TruSeq Small RNA library prep kit (Illumina) was used. Samples were not multiplexed. Strand specificity is non-stranded. Type of starting material is total RNA.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA