Entry Detail



General Information

Database ID:exR0209122
RNA Name:AGO1
RNA Type:mRNA
Chromosome:chr1
Starnd:+
Coordinate:
Start Site(bp):35869808End Site(bp):35930532
External Links:ENSG00000092847



Disease Information

Disease Name:Subarachnoid Hemorrhage
Disease Category:Nervous System Diseases
MeSH ID:D013345
Type:Diseases Category/Nervous System Diseases
Alias:SAH (Subarachnoid Hemorrhage)//SAHs (Subarachnoid Hemorrhage)//Hemorrhage, Subarachnoid//Hemorrhages, Subarachnoid//Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Aneurysmal//Aneurysmal Subarachnoid Hemorrhage//Aneurysmal Subarachnoid Hemorrhages//Hemorrhage, Aneurysmal Subarachnoid//Hemorrhages, Aneurysmal Subarachnoid//Subarachnoid Hemorrhages, Aneurysmal//Subarachnoid Hemorrhage, Spontaneous//Hemorrhage, Spontaneous Subarachnoid//Hemorrhages, Spontaneous Subarachnoid//Spontaneous Subarachnoid Hemorrhage//Spontaneous Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Spontaneous//Perinatal Subarachnoid Hemorrhage//Hemorrhage, Perinatal Subarachnoid//Hemorrhages, Perinatal Subarachnoid//Perinatal Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Perinatal//Subarachnoid Hemorrhages, Perinatal//Subarachnoid Hemorrhage, Intracranial//Hemorrhage, Intracranial Subarachnoid//Hemorrhages, Intracranial Subarachnoid//Intracranial Subarachnoid Hemorrhage//Intracranial Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Intracranial



Expression Detail

GEO ID:GSE121868
Description:Profiles of Extracellular RNA in Cerebrospinal Fluid and Plasma from Subarachnoid Hemorrhage Patients
Experimental Design:Disease Sample Source
Case Disease Type:Subarachnoid Hemorrhage
Case Disease SubType:NA
Case Sample:Subarachnoid Hemorrhage
Control Sample:Blood Plasma
Number of Case:257
Number of Control:266
Number of Samples:523





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
MT-ND4L
chrMT
10470
10766
+
ESPL1
chr12
53268299
53293638
+
SAMD4B
chr19
39342396
39385710
+
CANX
chr5
179678628
179731641
+
NFATC2IP
chr16
28950807
28967097
+
LAMTOR1
chr11
72085895
72103297
-
PSMD2
chr3
184299198
184309050
+
AP1B1
chr22
29327680
29423179
-
PJA2
chr5
109334713
109409974
-
KDM4B
chr19
4969113
5153598
+
REC8
chr14
24171853
24180257
+
PTMA
chr2
231706895
231713541
+
HLA-A
chr6
29941260
29945884
+
FTO
chr16
53701692
54158512
+
KRIT1
chr7
92198969
92246166
-
DNMBP
chr10
99875577
100009947
-
AP002990.1
chr11
62559603
62591531
-
RPL36AL
chr14
49618530
49620626
-
SMS
chrX
21940709
21994837
+
SPINT2
chr19
38244035
38292615
+
KLHL36
chr16
84648511
84667686
+
PANX1
chr11
94128841
94181968
+
CALM1
chr14
90396502
90408268
+
PRPF40A
chr2
152651593
152717997
-
AGO2
chr8
140520156
140635633
-
NEURL4
chr17
7315628
7329393
-
RPL32
chr3
12834485
12841582
-
RPL8
chr8
144789765
144792587
-
LCOR
chr10
96832282
96995959
+
SND1
chr7
127652194
128092609
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC023509.1
chr12
53441741
53467528
+
AC007347.1
chr16
54033997
54054583
-
AC022034.3
chr8
53394110
53484067
-
LINC01641
chr1
227393554
227431035
+
TUG1
chr22
30969245
30979395
+
XIST
chrX
73820649
73852723
-
Display:



Experiment Detail

GEO ID:GSE121868
Sample Source:Blood
Source Fraction:Plasma
Platform:GPL11154
Method:NGS
Num of detected RNA Type:5
Num of detected RNAs of this Type:17671
Sample treatment protocol:NA
RNA Extract protocol:total RNA RNA was isolated using MiRVana Paris (Ambion).
RNA library preparation protocol:TruSeq Small RNA library prep kit (Illumina) was used. Samples were not multiplexed. Strand specificity is non-stranded. Type of starting material is total RNA.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA