Entry Detail



General Information

Database ID:exR0209128
RNA Name:AGPAT3
RNA Type:mRNA
Chromosome:chr21
Starnd:+
Coordinate:
Start Site(bp):43865223End Site(bp):43987592
External Links:ENSG00000160216



Disease Information

Disease Name:Subarachnoid Hemorrhage
Disease Category:Nervous System Diseases
MeSH ID:D013345
Type:Diseases Category/Nervous System Diseases
Alias:SAH (Subarachnoid Hemorrhage)//SAHs (Subarachnoid Hemorrhage)//Hemorrhage, Subarachnoid//Hemorrhages, Subarachnoid//Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Aneurysmal//Aneurysmal Subarachnoid Hemorrhage//Aneurysmal Subarachnoid Hemorrhages//Hemorrhage, Aneurysmal Subarachnoid//Hemorrhages, Aneurysmal Subarachnoid//Subarachnoid Hemorrhages, Aneurysmal//Subarachnoid Hemorrhage, Spontaneous//Hemorrhage, Spontaneous Subarachnoid//Hemorrhages, Spontaneous Subarachnoid//Spontaneous Subarachnoid Hemorrhage//Spontaneous Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Spontaneous//Perinatal Subarachnoid Hemorrhage//Hemorrhage, Perinatal Subarachnoid//Hemorrhages, Perinatal Subarachnoid//Perinatal Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Perinatal//Subarachnoid Hemorrhages, Perinatal//Subarachnoid Hemorrhage, Intracranial//Hemorrhage, Intracranial Subarachnoid//Hemorrhages, Intracranial Subarachnoid//Intracranial Subarachnoid Hemorrhage//Intracranial Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Intracranial



Expression Detail

GEO ID:GSE121868
Description:Profiles of Extracellular RNA in Cerebrospinal Fluid and Plasma from Subarachnoid Hemorrhage Patients
Experimental Design:Disease Sample Source
Case Disease Type:Subarachnoid Hemorrhage
Case Disease SubType:NA
Case Sample:Subarachnoid Hemorrhage
Control Sample:Blood Plasma
Number of Case:257
Number of Control:266
Number of Samples:523





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
TUBB
chr6
30720352
30725426
+
WDR54
chr2
74421678
74425755
+
RPLP1
chr15
69452814
69456205
+
CARD9
chr9
136361903
136373681
-
VAPB
chr20
58389229
58451101
+
IPO9
chr1
201829149
201884291
+
KCTD3
chr1
215567304
215621807
+
IMP3
chr15
75639085
75648706
-
CLN3
chr16
28474111
28495575
-
OSGEP
chr14
20446401
20455089
-
PPRC1
chr10
102132994
102150333
+
CKLF
chr16
66552563
66566251
+
PDIA4
chr7
149003062
149028662
-
RBM15
chr1
110338506
110346681
+
RPL27A
chr11
8682788
8714759
+
ANKRD28
chr3
15667236
15859771
-
HLA-B
chr6
31269491
31357188
-
BHLHE40
chr3
4979437
4985323
+
SQSTM1
chr5
179806398
179838078
+
RER1
chr1
2391775
2405442
+
LAMC1
chr1
183023420
183145592
+
RUNDC1
chr17
42980565
42993690
+
POMK
chr8
43093506
43123434
+
GON4L
chr1
155749662
155859400
-
ACAP3
chr1
1292390
1309609
-
DTNBP1
chr6
15522801
15663058
-
PIK3R2
chr19
18153163
18170532
+
ACIN1
chr14
23058564
23095614
-
AC007192.1
chr19
18153158
18178117
+
SPC24
chr19
11131520
11155808
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AL049840.4
chr14
103694516
103695050
-
AC010326.4
chr19
57867038
57868172
-
AL355075.4
chr14
20343048
20343685
-
LINC00665
chr19
36313067
36331770
-
LINC01754
chr20
47391925
47412327
-
Display:



Experiment Detail

GEO ID:GSE121868
Sample Source:Blood
Source Fraction:Plasma
Platform:GPL11154
Method:NGS
Num of detected RNA Type:5
Num of detected RNAs of this Type:17671
Sample treatment protocol:NA
RNA Extract protocol:total RNA RNA was isolated using MiRVana Paris (Ambion).
RNA library preparation protocol:TruSeq Small RNA library prep kit (Illumina) was used. Samples were not multiplexed. Strand specificity is non-stranded. Type of starting material is total RNA.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA