Entry Detail



General Information

Database ID:exR0209172
RNA Name:AK2
RNA Type:mRNA
Chromosome:chr1
Starnd:-
Coordinate:
Start Site(bp):33007940End Site(bp):33080996
External Links:ENSG00000004455



Disease Information

Disease Name:Subarachnoid Hemorrhage
Disease Category:Nervous System Diseases
MeSH ID:D013345
Type:Diseases Category/Nervous System Diseases
Alias:SAH (Subarachnoid Hemorrhage)//SAHs (Subarachnoid Hemorrhage)//Hemorrhage, Subarachnoid//Hemorrhages, Subarachnoid//Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Aneurysmal//Aneurysmal Subarachnoid Hemorrhage//Aneurysmal Subarachnoid Hemorrhages//Hemorrhage, Aneurysmal Subarachnoid//Hemorrhages, Aneurysmal Subarachnoid//Subarachnoid Hemorrhages, Aneurysmal//Subarachnoid Hemorrhage, Spontaneous//Hemorrhage, Spontaneous Subarachnoid//Hemorrhages, Spontaneous Subarachnoid//Spontaneous Subarachnoid Hemorrhage//Spontaneous Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Spontaneous//Perinatal Subarachnoid Hemorrhage//Hemorrhage, Perinatal Subarachnoid//Hemorrhages, Perinatal Subarachnoid//Perinatal Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Perinatal//Subarachnoid Hemorrhages, Perinatal//Subarachnoid Hemorrhage, Intracranial//Hemorrhage, Intracranial Subarachnoid//Hemorrhages, Intracranial Subarachnoid//Intracranial Subarachnoid Hemorrhage//Intracranial Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Intracranial



Expression Detail

GEO ID:GSE121868
Description:Profiles of Extracellular RNA in Cerebrospinal Fluid and Plasma from Subarachnoid Hemorrhage Patients
Experimental Design:Disease Sample Source
Case Disease Type:Subarachnoid Hemorrhage
Case Disease SubType:NA
Case Sample:Subarachnoid Hemorrhage
Control Sample:Blood Plasma
Number of Case:257
Number of Control:266
Number of Samples:523





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
IFI30
chr19
18173162
18178117
+
C19orf53
chr19
13774456
13778773
+
RBM10
chrX
47145221
47186813
+
RPL5
chr1
92832013
92841924
+
SAP30BP
chr17
75667251
75708062
+
PPP2CA
chr5
134194332
134226073
-
RPLP1
chr15
69452814
69456205
+
REXO1
chr19
1815248
1848483
-
ARL2BP
chr16
57245259
57253635
+
GTF3C5
chr9
133030675
133058503
+
GRID1
chr10
85599552
86366795
-
OGFOD3
chr17
82389210
82418637
-
MRPL4
chr19
10251901
10260055
+
EIF4E
chr4
98871684
98930637
-
DDIT4
chr10
72273924
72276036
+
MYBBP1A
chr17
4538897
4555631
-
MZT1
chr13
72708367
72727629
-
AC011448.1
chr19
19516227
19536076
+
MTRNR2L1
chr17
22523111
22524663
+
CDC42SE1
chr1
151050971
151070325
-
HAUS1
chr18
46104378
46128333
+
POMP
chr13
28659104
28678959
+
AP2A1
chr19
49766968
49807113
+
HLA-B
chr6
31269491
31357188
-
OCIAD1
chr4
48805212
48861817
+
MAL2
chr8
119165034
119245673
+
RPS5
chr19
58386400
58394806
+
HLA-DQB1
chr6
32659467
32668383
-
STRAP
chr12
15882387
15903478
+
SLC25A37
chr8
23528956
23575463
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-204-5p
chr9
70810031
70810052
-
hsa-miR-211-5p
chr15
31065095
31065116
-
hsa-miR-141-3p
chr12
6964155
6964176
+
hsa-miR-299-3p
chr14
101023832
101023853
+
hsa-miR-1224-5p
chr3
184241405
184241423
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC009133.5
chr16
29808679
29812227
+
AL121985.1
chr1
160670778
160699761
+
GUSBP11
chr22
23638487
23717356
-
LINC02381
chr12
54126082
54147485
+
LINC02539
chr6
137730170
137792835
-
MALAT1
chr11
65497688
65506516
+
SNHG17
chr20
38419638
38435409
-
SNHG5
chr6
85650491
85678932
-
Display:



Experiment Detail

GEO ID:GSE121868
Sample Source:Blood
Source Fraction:Plasma
Platform:GPL11154
Method:NGS
Num of detected RNA Type:5
Num of detected RNAs of this Type:17671
Sample treatment protocol:NA
RNA Extract protocol:total RNA RNA was isolated using MiRVana Paris (Ambion).
RNA library preparation protocol:TruSeq Small RNA library prep kit (Illumina) was used. Samples were not multiplexed. Strand specificity is non-stranded. Type of starting material is total RNA.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA