Entry Detail



General Information

Database ID:exR0209174
RNA Name:AK4
RNA Type:mRNA
Chromosome:chr1
Starnd:+
Coordinate:
Start Site(bp):65147549End Site(bp):65232145
External Links:ENSG00000162433



Disease Information

Disease Name:Subarachnoid Hemorrhage
Disease Category:Nervous System Diseases
MeSH ID:D013345
Type:Diseases Category/Nervous System Diseases
Alias:SAH (Subarachnoid Hemorrhage)//SAHs (Subarachnoid Hemorrhage)//Hemorrhage, Subarachnoid//Hemorrhages, Subarachnoid//Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Aneurysmal//Aneurysmal Subarachnoid Hemorrhage//Aneurysmal Subarachnoid Hemorrhages//Hemorrhage, Aneurysmal Subarachnoid//Hemorrhages, Aneurysmal Subarachnoid//Subarachnoid Hemorrhages, Aneurysmal//Subarachnoid Hemorrhage, Spontaneous//Hemorrhage, Spontaneous Subarachnoid//Hemorrhages, Spontaneous Subarachnoid//Spontaneous Subarachnoid Hemorrhage//Spontaneous Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Spontaneous//Perinatal Subarachnoid Hemorrhage//Hemorrhage, Perinatal Subarachnoid//Hemorrhages, Perinatal Subarachnoid//Perinatal Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Perinatal//Subarachnoid Hemorrhages, Perinatal//Subarachnoid Hemorrhage, Intracranial//Hemorrhage, Intracranial Subarachnoid//Hemorrhages, Intracranial Subarachnoid//Intracranial Subarachnoid Hemorrhage//Intracranial Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Intracranial



Expression Detail

GEO ID:GSE121868
Description:Profiles of Extracellular RNA in Cerebrospinal Fluid and Plasma from Subarachnoid Hemorrhage Patients
Experimental Design:Disease Sample Source
Case Disease Type:Subarachnoid Hemorrhage
Case Disease SubType:NA
Case Sample:Subarachnoid Hemorrhage
Control Sample:Blood Plasma
Number of Case:257
Number of Control:266
Number of Samples:523





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
MYH9
chr22
36281277
36388067
-
MAPKAPK2
chr1
206684944
206734283
+
RER1
chr1
2391775
2405442
+
RELA
chr11
65653597
65663090
-
SFXN1
chr5
175477062
175529742
+
SMN2
chr5
70049612
70078522
+
TNIP1
chr5
151029945
151093577
-
TM9SF3
chr10
96518110
96587452
-
DPH2
chr1
43970000
43973369
+
STAT1
chr2
190908460
191020960
-
CD22
chr19
35319261
35347361
+
IGF2
chr11
2129112
2141238
-
MTRNR2L1
chr17
22523111
22524663
+
UBE3A
chr15
25333728
25439051
-
NFATC2IP
chr16
28950807
28967097
+
RPL14
chr3
40457292
40468587
+
SDCBP
chr8
58552924
58582859
+
DHX15
chr4
24517441
24584554
-
TFRC
chr3
196027183
196082096
-
PPP5D1
chr19
46480796
46601200
-
YWHAB
chr20
44885702
44908532
+
ACTG1
chr17
81509971
81523847
-
RBCK1
chr20
407498
430966
+
TMED5
chr1
93149742
93180516
-
CBX3
chr7
26201162
26213607
+
APOE
chr19
44905791
44909393
+
RPL15
chr3
23916545
23924374
+
HLA-B
chr6
31269491
31357188
-
PATZ1
chr22
31325804
31346346
-
CD47
chr3
108043091
108091862
-
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-362-3p
chrX
50009005
50009026
+
hsa-miR-556-3p
chr1
162342600
162342621
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AL359924.1
chr1
237862175
237928321
+
AL627309.5
chr1
141474
173862
-
BX284668.2
chr1
16870945
16883659
+
LINC01641
chr1
227393554
227431035
+
Display:



Experiment Detail

GEO ID:GSE121868
Sample Source:Blood
Source Fraction:Plasma
Platform:GPL11154
Method:NGS
Num of detected RNA Type:5
Num of detected RNAs of this Type:17671
Sample treatment protocol:NA
RNA Extract protocol:total RNA RNA was isolated using MiRVana Paris (Ambion).
RNA library preparation protocol:TruSeq Small RNA library prep kit (Illumina) was used. Samples were not multiplexed. Strand specificity is non-stranded. Type of starting material is total RNA.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA