Entry Detail



General Information

Database ID:exR0209181
RNA Name:AKAP11
RNA Type:mRNA
Chromosome:chr13
Starnd:+
Coordinate:
Start Site(bp):42272152End Site(bp):42323261
External Links:ENSG00000023516



Disease Information

Disease Name:Subarachnoid Hemorrhage
Disease Category:Nervous System Diseases
MeSH ID:D013345
Type:Diseases Category/Nervous System Diseases
Alias:SAH (Subarachnoid Hemorrhage)//SAHs (Subarachnoid Hemorrhage)//Hemorrhage, Subarachnoid//Hemorrhages, Subarachnoid//Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Aneurysmal//Aneurysmal Subarachnoid Hemorrhage//Aneurysmal Subarachnoid Hemorrhages//Hemorrhage, Aneurysmal Subarachnoid//Hemorrhages, Aneurysmal Subarachnoid//Subarachnoid Hemorrhages, Aneurysmal//Subarachnoid Hemorrhage, Spontaneous//Hemorrhage, Spontaneous Subarachnoid//Hemorrhages, Spontaneous Subarachnoid//Spontaneous Subarachnoid Hemorrhage//Spontaneous Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Spontaneous//Perinatal Subarachnoid Hemorrhage//Hemorrhage, Perinatal Subarachnoid//Hemorrhages, Perinatal Subarachnoid//Perinatal Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Perinatal//Subarachnoid Hemorrhages, Perinatal//Subarachnoid Hemorrhage, Intracranial//Hemorrhage, Intracranial Subarachnoid//Hemorrhages, Intracranial Subarachnoid//Intracranial Subarachnoid Hemorrhage//Intracranial Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Intracranial



Expression Detail

GEO ID:GSE121868
Description:Profiles of Extracellular RNA in Cerebrospinal Fluid and Plasma from Subarachnoid Hemorrhage Patients
Experimental Design:Disease Sample Source
Case Disease Type:Subarachnoid Hemorrhage
Case Disease SubType:NA
Case Sample:Subarachnoid Hemorrhage
Control Sample:Blood Plasma
Number of Case:257
Number of Control:266
Number of Samples:523





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC005670.2
chr17
46923133
47049932
+
MAPK1
chr22
21754500
21867680
-
ZNF100
chr19
21722771
21767579
-
CANX
chr5
179678628
179731641
+
TPI1
chr12
6867119
6870948
+
AIFM1
chrX
130129362
130165887
-
RAB3GAP2
chr1
220148293
220272453
-
TOP3A
chr17
18271428
18315007
-
NOC2L
chr1
944203
959309
-
DYRK1A
chr21
37365573
37526358
+
PSMB1
chr6
170535120
170553307
-
CSNK1A1
chr5
149492982
149551471
-
ZNF711
chrX
85244032
85273362
+
RPL15
chr3
23916545
23924374
+
C16orf91
chr16
1419752
1420756
-
ATP13A2
chr1
16985958
17011928
-
NPTX2
chr7
98617285
98629869
+
EDARADD
chr1
236348257
236502915
+
MAZ
chr16
29806106
29811164
+
SEC31A
chr4
82818509
82901166
-
HOMEZ
chr14
23272422
23299447
-
PIK3CB
chr3
138652698
138834928
-
HLA-DRB1
chr6
32578769
32589848
-
CCT8
chr21
29055805
29073797
-
FSCN1
chr7
5592816
5606655
+
RPL22
chr1
6185020
6209389
-
CXXC5
chr5
139647299
139683882
+
LDHA
chr11
18394560
18408425
+
CMPK1
chr1
47333797
47378839
+
KCMF1
chr2
84971093
85059472
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-130a-3p
chr11
57641252
57641273
+
hsa-miR-362-3p
chrX
50009005
50009026
+
hsa-miR-541-3p
chr14
101064548
101064569
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
MEG3
chr14
100779410
100861031
+
XIST
chrX
73820649
73852723
-
Display:



Experiment Detail

GEO ID:GSE121868
Sample Source:Blood
Source Fraction:Plasma
Platform:GPL11154
Method:NGS
Num of detected RNA Type:5
Num of detected RNAs of this Type:17671
Sample treatment protocol:NA
RNA Extract protocol:total RNA RNA was isolated using MiRVana Paris (Ambion).
RNA library preparation protocol:TruSeq Small RNA library prep kit (Illumina) was used. Samples were not multiplexed. Strand specificity is non-stranded. Type of starting material is total RNA.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA