Entry Detail



General Information

Database ID:exR0209195
RNA Name:AKIRIN2
RNA Type:mRNA
Chromosome:chr6
Starnd:-
Coordinate:
Start Site(bp):87674860End Site(bp):87702233
External Links:ENSG00000135334



Disease Information

Disease Name:Subarachnoid Hemorrhage
Disease Category:Nervous System Diseases
MeSH ID:D013345
Type:Diseases Category/Nervous System Diseases
Alias:SAH (Subarachnoid Hemorrhage)//SAHs (Subarachnoid Hemorrhage)//Hemorrhage, Subarachnoid//Hemorrhages, Subarachnoid//Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Aneurysmal//Aneurysmal Subarachnoid Hemorrhage//Aneurysmal Subarachnoid Hemorrhages//Hemorrhage, Aneurysmal Subarachnoid//Hemorrhages, Aneurysmal Subarachnoid//Subarachnoid Hemorrhages, Aneurysmal//Subarachnoid Hemorrhage, Spontaneous//Hemorrhage, Spontaneous Subarachnoid//Hemorrhages, Spontaneous Subarachnoid//Spontaneous Subarachnoid Hemorrhage//Spontaneous Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Spontaneous//Perinatal Subarachnoid Hemorrhage//Hemorrhage, Perinatal Subarachnoid//Hemorrhages, Perinatal Subarachnoid//Perinatal Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Perinatal//Subarachnoid Hemorrhages, Perinatal//Subarachnoid Hemorrhage, Intracranial//Hemorrhage, Intracranial Subarachnoid//Hemorrhages, Intracranial Subarachnoid//Intracranial Subarachnoid Hemorrhage//Intracranial Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Intracranial



Expression Detail

GEO ID:GSE121868
Description:Profiles of Extracellular RNA in Cerebrospinal Fluid and Plasma from Subarachnoid Hemorrhage Patients
Experimental Design:Disease Sample Source
Case Disease Type:Subarachnoid Hemorrhage
Case Disease SubType:NA
Case Sample:Subarachnoid Hemorrhage
Control Sample:Blood Plasma
Number of Case:257
Number of Control:266
Number of Samples:523





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
RPS27
chr1
153990762
153992155
+
PLCB3
chr11
64251523
64269150
+
TM9SF4
chr20
32109714
32167258
+
SLAIN2
chr4
48341529
48426201
+
COX4I1
chr16
85798633
85807068
+
FASN
chr17
82078338
82098294
-
ADGRL3
chr4
61201258
62078335
+
PITX1
chr5
135027734
135034813
-
RPLP0
chr12
120196699
120201235
-
KLC2
chr11
66257294
66267860
+
SOX4
chr6
21593751
21598619
+
UBE2Z
chr17
48908407
48929056
+
SMARCAL1
chr2
216412414
216483053
+
HCN1
chr5
45254948
45696498
-
HLA-DRA
chr6
32439878
32445046
+
SECISBP2
chr9
89318500
89359663
+
TAF7
chr5
141260225
141320784
-
ELOVL5
chr6
53267398
53349179
-
RPL18
chr19
48615328
48619184
-
UBC
chr12
124911604
124917368
-
SCAND1
chr20
35953617
35959472
-
TUBA1C
chr12
49188736
49274603
+
RACGAP1
chr12
49976923
50033136
-
ACTR10
chr14
58200080
58235636
+
HSP90AB1
chr6
44246166
44253888
+
AFTPH
chr2
64524305
64593005
+
EDARADD
chr1
236348257
236502915
+
UBE2Q2L
chr15
84172490
84182234
+
MFSD11
chr17
76735865
76781449
+
TP53
chr17
7661779
7687550
-
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-3648
chr21
8987026
8987046
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC079949.1
chr12
127142029
127146532
-
AL139819.1
chr10
100335563
100346390
-
RASAL2-AS1
chr1
178090677
178093984
-
SNHG25
chr17
64145970
64146476
+
Display:



Experiment Detail

GEO ID:GSE121868
Sample Source:Blood
Source Fraction:Plasma
Platform:GPL11154
Method:NGS
Num of detected RNA Type:5
Num of detected RNAs of this Type:17671
Sample treatment protocol:NA
RNA Extract protocol:total RNA RNA was isolated using MiRVana Paris (Ambion).
RNA library preparation protocol:TruSeq Small RNA library prep kit (Illumina) was used. Samples were not multiplexed. Strand specificity is non-stranded. Type of starting material is total RNA.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA