Entry Detail



General Information

Database ID:exR0209223
RNA Name:ALDH16A1
RNA Type:mRNA
Chromosome:chr19
Starnd:+
Coordinate:
Start Site(bp):49453225End Site(bp):49471050
External Links:ENSG00000161618



Disease Information

Disease Name:Subarachnoid Hemorrhage
Disease Category:Nervous System Diseases
MeSH ID:D013345
Type:Diseases Category/Nervous System Diseases
Alias:SAH (Subarachnoid Hemorrhage)//SAHs (Subarachnoid Hemorrhage)//Hemorrhage, Subarachnoid//Hemorrhages, Subarachnoid//Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Aneurysmal//Aneurysmal Subarachnoid Hemorrhage//Aneurysmal Subarachnoid Hemorrhages//Hemorrhage, Aneurysmal Subarachnoid//Hemorrhages, Aneurysmal Subarachnoid//Subarachnoid Hemorrhages, Aneurysmal//Subarachnoid Hemorrhage, Spontaneous//Hemorrhage, Spontaneous Subarachnoid//Hemorrhages, Spontaneous Subarachnoid//Spontaneous Subarachnoid Hemorrhage//Spontaneous Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Spontaneous//Perinatal Subarachnoid Hemorrhage//Hemorrhage, Perinatal Subarachnoid//Hemorrhages, Perinatal Subarachnoid//Perinatal Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Perinatal//Subarachnoid Hemorrhages, Perinatal//Subarachnoid Hemorrhage, Intracranial//Hemorrhage, Intracranial Subarachnoid//Hemorrhages, Intracranial Subarachnoid//Intracranial Subarachnoid Hemorrhage//Intracranial Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Intracranial



Expression Detail

GEO ID:GSE121868
Description:Profiles of Extracellular RNA in Cerebrospinal Fluid and Plasma from Subarachnoid Hemorrhage Patients
Experimental Design:Disease Sample Source
Case Disease Type:Subarachnoid Hemorrhage
Case Disease SubType:NA
Case Sample:Subarachnoid Hemorrhage
Control Sample:Blood Plasma
Number of Case:257
Number of Control:266
Number of Samples:523





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
MED22
chr9
133338312
133348131
-
SOX4
chr6
21593751
21598619
+
SLC52A2
chr8
144354135
144361272
+
LARGE2
chr11
45921621
45929096
+
EEF1A1
chr6
73515750
73523797
-
FASTK
chr7
151076593
151080866
-
FAT1
chr4
186587794
186726722
-
LGALS9
chr17
27629798
27649560
+
PPP1R10
chr6
30600413
30618612
-
GRB10
chr7
50590063
50793462
-
ATP6V1G2-DDX39B
chr6
31530219
31546608
-
SLC25A11
chr17
4937130
4940053
-
GSPT1
chr16
11868128
11916082
-
HOXB3
chr17
48548870
48604912
-
THOP1
chr19
2785503
2815807
+
CYB5B
chr16
69424619
69466264
+
ARFGAP1
chr20
63272785
63289790
+
CBX6
chr22
38861422
38872249
-
CTNNA1
chr5
138610967
138935034
+
B3GALT6
chr1
1232237
1235041
+
ADAMTS1
chr21
26835755
26845409
-
DHX36
chr3
154272546
154324487
-
ISG20L2
chr1
156721891
156728799
-
CDC34
chr19
531760
542092
+
ZNRF2
chr7
30284597
30367689
+
BCR
chr22
23179704
23318037
+
EEF2
chr19
3976056
3985463
-
RBM15
chr1
110338506
110346681
+
GPATCH2L
chr14
76151916
76254342
+
DDX39B
chr6
31530219
31542448
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC020928.2
chr19
36773712
36775908
-
AC067852.1
chr17
42536510
42562062
+
AC132217.1
chr11
2129121
2129964
-
VPS9D1-AS1
chr16
89711856
89718165
+
Display:



Experiment Detail

GEO ID:GSE121868
Sample Source:Blood
Source Fraction:Plasma
Platform:GPL11154
Method:NGS
Num of detected RNA Type:5
Num of detected RNAs of this Type:17671
Sample treatment protocol:NA
RNA Extract protocol:total RNA RNA was isolated using MiRVana Paris (Ambion).
RNA library preparation protocol:TruSeq Small RNA library prep kit (Illumina) was used. Samples were not multiplexed. Strand specificity is non-stranded. Type of starting material is total RNA.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA