Entry Detail



General Information

Database ID:exR0215034
RNA Name:HLA-B
RNA Type:mRNA
Chromosome:chr6
Starnd:-
Coordinate:
Start Site(bp):31269491End Site(bp):31357188
External Links:ENSG00000234745



Disease Information

Disease Name:Subarachnoid Hemorrhage
Disease Category:Nervous System Diseases
MeSH ID:D013345
Type:Diseases Category/Nervous System Diseases
Alias:SAH (Subarachnoid Hemorrhage)//SAHs (Subarachnoid Hemorrhage)//Hemorrhage, Subarachnoid//Hemorrhages, Subarachnoid//Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Aneurysmal//Aneurysmal Subarachnoid Hemorrhage//Aneurysmal Subarachnoid Hemorrhages//Hemorrhage, Aneurysmal Subarachnoid//Hemorrhages, Aneurysmal Subarachnoid//Subarachnoid Hemorrhages, Aneurysmal//Subarachnoid Hemorrhage, Spontaneous//Hemorrhage, Spontaneous Subarachnoid//Hemorrhages, Spontaneous Subarachnoid//Spontaneous Subarachnoid Hemorrhage//Spontaneous Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Spontaneous//Perinatal Subarachnoid Hemorrhage//Hemorrhage, Perinatal Subarachnoid//Hemorrhages, Perinatal Subarachnoid//Perinatal Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Perinatal//Subarachnoid Hemorrhages, Perinatal//Subarachnoid Hemorrhage, Intracranial//Hemorrhage, Intracranial Subarachnoid//Hemorrhages, Intracranial Subarachnoid//Intracranial Subarachnoid Hemorrhage//Intracranial Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Intracranial



Expression Detail

GEO ID:GSE121868
Description:Profiles of Extracellular RNA in Cerebrospinal Fluid and Plasma from Subarachnoid Hemorrhage Patients
Experimental Design:Disease Sample Source
Case Disease Type:Subarachnoid Hemorrhage
Case Disease SubType:NA
Case Sample:Subarachnoid Hemorrhage
Control Sample:Blood Plasma
Number of Case:257
Number of Control:266
Number of Samples:523





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ACTA2
chr10
88935074
88991339
-
ACTG1
chr17
81509971
81523847
-
ADPRHL2
chr1
36088892
36093932
+
AK4
chr1
65147549
65232145
+
AC092647.5
chr7
55887277
55955239
+
ADM
chr11
10305073
10307397
+
AHCY
chr20
34280268
34311802
-
ACTB
chr7
5527148
5563784
-
ABCC10
chr6
43427366
43450427
+
ACOT7
chr1
6264269
6394391
-
ADAR
chr1
154582057
154628013
-
AGTRAP
chr1
11736084
11754802
+
ADI1
chr2
3497366
3519531
-
AK2
chr1
33007940
33080996
-
ABLIM1
chr10
114431113
114768061
-
AC069503.2
chr12
121888809
121921470
+
AL109827.1
chr20
35632340
35674544
-
AGAP3
chr7
151085831
151144436
+
AC011462.1
chr19
41350853
41425001
+
AC135050.2
chr16
31083439
31094956
-
AC046185.1
chr17
63702845
63752097
-
ADRM1
chr20
62302093
62308862
+
AC010422.3
chr19
12643831
12648397
-
AC005258.1
chr19
2269525
2341172
+
ADGRG2
chrX
18989307
19122637
-
ACTR3
chr2
113890063
113962596
+
ADCY1
chr7
45574140
45723116
+
ACTA1
chr1
229431245
229434098
-
ACADSB
chr10
123008979
123058290
+
AICDA
chr12
8602170
8612867
-
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-155-5p
chr21
25573983
25574006
+
hsa-miR-6891-5p
chr6
31355297
31355315
-
hsa-miR-6516-5p
chr17
77089428
77089449
+
hsa-miR-6516-3p
chr17
77089469
77089490
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC002470.2
chr22
20979462
20998121
+
AC006942.1
chr19
49808933
49809738
+
AC019205.1
chr6
73263212
73301789
+
AC023509.1
chr12
53441741
53467528
+
AC067852.2
chr17
42552436
42554748
-
AC091564.7
chr11
6610883
6616594
-
AC093157.1
chr1
101025844
101090513
+
AC134043.2
chr5
159209921
159248796
+
AC139530.1
chr17
81701324
81703300
-
AC147651.4
chr7
603185
608482
+
Display:



Experiment Detail

GEO ID:GSE121868
Sample Source:Blood
Source Fraction:Plasma
Platform:GPL11154
Method:NGS
Num of detected RNA Type:5
Num of detected RNAs of this Type:17671
Sample treatment protocol:NA
RNA Extract protocol:total RNA RNA was isolated using MiRVana Paris (Ambion).
RNA library preparation protocol:TruSeq Small RNA library prep kit (Illumina) was used. Samples were not multiplexed. Strand specificity is non-stranded. Type of starting material is total RNA.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA