Entry Detail



General Information

Database ID:exR0215042
RNA Name:HLA-DQA1
RNA Type:mRNA
Chromosome:chr6
Starnd:+
Coordinate:
Start Site(bp):32628179End Site(bp):32647062
External Links:ENSG00000196735



Disease Information

Disease Name:Subarachnoid Hemorrhage
Disease Category:Nervous System Diseases
MeSH ID:D013345
Type:Diseases Category/Nervous System Diseases
Alias:SAH (Subarachnoid Hemorrhage)//SAHs (Subarachnoid Hemorrhage)//Hemorrhage, Subarachnoid//Hemorrhages, Subarachnoid//Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Aneurysmal//Aneurysmal Subarachnoid Hemorrhage//Aneurysmal Subarachnoid Hemorrhages//Hemorrhage, Aneurysmal Subarachnoid//Hemorrhages, Aneurysmal Subarachnoid//Subarachnoid Hemorrhages, Aneurysmal//Subarachnoid Hemorrhage, Spontaneous//Hemorrhage, Spontaneous Subarachnoid//Hemorrhages, Spontaneous Subarachnoid//Spontaneous Subarachnoid Hemorrhage//Spontaneous Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Spontaneous//Perinatal Subarachnoid Hemorrhage//Hemorrhage, Perinatal Subarachnoid//Hemorrhages, Perinatal Subarachnoid//Perinatal Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Perinatal//Subarachnoid Hemorrhages, Perinatal//Subarachnoid Hemorrhage, Intracranial//Hemorrhage, Intracranial Subarachnoid//Hemorrhages, Intracranial Subarachnoid//Intracranial Subarachnoid Hemorrhage//Intracranial Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Intracranial



Expression Detail

GEO ID:GSE121868
Description:Profiles of Extracellular RNA in Cerebrospinal Fluid and Plasma from Subarachnoid Hemorrhage Patients
Experimental Design:Disease Sample Source
Case Disease Type:Subarachnoid Hemorrhage
Case Disease SubType:NA
Case Sample:Subarachnoid Hemorrhage
Control Sample:Blood Plasma
Number of Case:257
Number of Control:266
Number of Samples:523





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ABCF1
chr6
30571393
30597179
+
ABI2
chr2
203328239
203447728
+
AC006538.2
chr19
2717769
2740048
-
AC007192.1
chr19
18153158
18178117
+
AC007998.2
chr18
35443871
35497940
-
AC011448.1
chr19
19516227
19536076
+
AC011462.1
chr19
41350853
41425001
+
AC026464.4
chr16
69299682
69322700
+
AC068580.4
chr11
1734821
1763954
-
AC073082.1
chr2
48632291
48755724
-
ACAD11
chr3
132558138
132660082
-
ACAD8
chr11
134253495
134265855
+
ACTA2
chr10
88935074
88991339
-
ACTB
chr7
5527148
5563784
-
ACTG1
chr17
81509971
81523847
-
ACTR3
chr2
113890063
113962596
+
ADPRHL2
chr1
36088892
36093932
+
AHCY
chr20
34280268
34311802
-
AHRR
chr5
271670
438291
+
AIFM1
chrX
130129362
130165887
-
AL021997.3
chr6
28267121
28281580
+
AL136454.1
chr1
192716132
192716653
+
ALDOA
chr16
30064164
30070457
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC005083.1
chr7
20217577
20221700
+
AC005899.4
chr17
32328441
32329395
+
AC007996.1
chr18
26542971
26545791
-
AC010618.3
chr19
17488990
17511889
-
AC012236.1
chr15
31221999
31230838
-
AC019205.1
chr6
73263212
73301789
+
AC099329.1
chr3
42785087
42852428
-
AC107027.3
chr3
131455126
131458598
-
AD000090.1
chr19
35557956
35581954
+
AL031428.1
chr1
23020147
23088058
-
Display:



Experiment Detail

GEO ID:GSE121868
Sample Source:Blood
Source Fraction:Plasma
Platform:GPL11154
Method:NGS
Num of detected RNA Type:5
Num of detected RNAs of this Type:17671
Sample treatment protocol:NA
RNA Extract protocol:total RNA RNA was isolated using MiRVana Paris (Ambion).
RNA library preparation protocol:TruSeq Small RNA library prep kit (Illumina) was used. Samples were not multiplexed. Strand specificity is non-stranded. Type of starting material is total RNA.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA