exRNAdisease

General Information

Database ID:

exR0216358

RNA Name:

LASP1

RNA Type:

mRNA

Chromosome:

chr17

Starnd:

Coordinate:

Start Site(bp):

38869859

End Site(bp):

38921770

External Links:

Disease Information

Disease Name:	Subarachnoid Hemorrhage
Disease Category:	Nervous System Diseases
MeSH ID:	D013345
Type:	Diseases Category/Nervous System Diseases
Alias:	SAH (Subarachnoid Hemorrhage)//SAHs (Subarachnoid Hemorrhage)//Hemorrhage, Subarachnoid//Hemorrhages, Subarachnoid//Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Aneurysmal//Aneurysmal Subarachnoid Hemorrhage//Aneurysmal Subarachnoid Hemorrhages//Hemorrhage, Aneurysmal Subarachnoid//Hemorrhages, Aneurysmal Subarachnoid//Subarachnoid Hemorrhages, Aneurysmal//Subarachnoid Hemorrhage, Spontaneous//Hemorrhage, Spontaneous Subarachnoid//Hemorrhages, Spontaneous Subarachnoid//Spontaneous Subarachnoid Hemorrhage//Spontaneous Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Spontaneous//Perinatal Subarachnoid Hemorrhage//Hemorrhage, Perinatal Subarachnoid//Hemorrhages, Perinatal Subarachnoid//Perinatal Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Perinatal//Subarachnoid Hemorrhages, Perinatal//Subarachnoid Hemorrhage, Intracranial//Hemorrhage, Intracranial Subarachnoid//Hemorrhages, Intracranial Subarachnoid//Intracranial Subarachnoid Hemorrhage//Intracranial Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Intracranial

Expression Detail

GEO ID:	GSE121868
Description:	Profiles of Extracellular RNA in Cerebrospinal Fluid and Plasma from Subarachnoid Hemorrhage Patients
Experimental Design:	Disease Sample Source
Case Disease Type:	Subarachnoid Hemorrhage
Case Disease SubType:	NA
Case Sample:	Subarachnoid Hemorrhage
Control Sample:	Blood Plasma
Number of Case:	257
Number of Control:	266
Number of Samples:	523

Regulatory Relationship

mRNA targets:

Gene Symbol	Chromosome	Start Site(bp)	End Site(bp)	Strand
ABHD14A-ACY1	chr3	51974706	51989183	+
AC007192.1	chr19	18153158	18178117	+
AC010422.3	chr19	12643831	12648397	-
AC010463.1	chr19	17267418	17282966	+
AC073896.1	chr12	56285916	56316059	-
AC093323.1	chr4	6663396	6676755	+
ACTG1	chr17	81509971	81523847	-
ACTR1B	chr2	97655939	97664044	-
ACY1	chr3	51983340	51989197	+
ADAR	chr1	154582057	154628013	-
ADM	chr11	10305073	10307397	+
AGFG2	chr7	100539203	100568220	+
AHCYL1	chr1	109984765	110023742	+
AIF1L	chr9	131096476	131123152	+
AKAP17A	chrX	1591604	1602520	+
AL022238.4	chr22	40346529	40410054	+
AL121845.3	chr20	63708864	63739103	+
AL132780.3	chr14	22946270	22982258	-
AL139011.2	chr1	160216800	160285130	-
ALDH18A1	chr10	95605941	95656711	-
ALDH5A1	chr6	24494867	24537207	+

miRNA targets:

miRNA Symbol	Chromosome	Start Site(bp)	End Site(bp)	Strand
hsa-miR-28-5p	chr3	188688794	188688815	+
hsa-miR-147a	chr9	120244985	120245004	-
hsa-miR-27b-3p	chr9	95085505	95085525	+
hsa-miR-206	chr6	52144401	52144422	+
hsa-miR-342-3p	chr14	100109715	100109737	+
hsa-miR-193b-3p	chr16	14304017	14304038	+
hsa-miR-296-3p	chr20	58817626	58817647	-
hsa-miR-423-5p	chr17	30117095	30117117	+
hsa-miR-873-5p	chr9	28888925	28888945	-
hsa-miR-1224-5p	chr3	184241405	184241423	+

circRNA targets:

lncRNA targets:

lncRNA Symbol	Chromosome	Start Site(bp)	End Site(bp)	Strand
AC091564.7	chr11	6610883	6616594	-
AC132217.1	chr11	2129121	2129964	-

Display:

Experiment Detail

GEO ID:	GSE121868
Sample Source:	Blood
Source Fraction:	Plasma
Platform:	GPL11154
Method:	NGS
Num of detected RNA Type:	5
Num of detected RNAs of this Type:	17671
Sample treatment protocol:	NA
RNA Extract protocol:	total RNA RNA was isolated using MiRVana Paris (Ambion).
RNA library preparation protocol:	TruSeq Small RNA library prep kit (Illumina) was used. Samples were not multiplexed. Strand specificity is non-stranded. Type of starting material is total RNA.

Reference