exRNAdisease

General Information

Database ID:

exR0217727

RNA Name:

MYH9

RNA Type:

mRNA

Chromosome:

chr22

Starnd:

Coordinate:

Start Site(bp):

36281277

End Site(bp):

36388067

External Links:

Disease Information

Disease Name:	Subarachnoid Hemorrhage
Disease Category:	Nervous System Diseases
MeSH ID:	D013345
Type:	Diseases Category/Nervous System Diseases
Alias:	SAH (Subarachnoid Hemorrhage)//SAHs (Subarachnoid Hemorrhage)//Hemorrhage, Subarachnoid//Hemorrhages, Subarachnoid//Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Aneurysmal//Aneurysmal Subarachnoid Hemorrhage//Aneurysmal Subarachnoid Hemorrhages//Hemorrhage, Aneurysmal Subarachnoid//Hemorrhages, Aneurysmal Subarachnoid//Subarachnoid Hemorrhages, Aneurysmal//Subarachnoid Hemorrhage, Spontaneous//Hemorrhage, Spontaneous Subarachnoid//Hemorrhages, Spontaneous Subarachnoid//Spontaneous Subarachnoid Hemorrhage//Spontaneous Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Spontaneous//Perinatal Subarachnoid Hemorrhage//Hemorrhage, Perinatal Subarachnoid//Hemorrhages, Perinatal Subarachnoid//Perinatal Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Perinatal//Subarachnoid Hemorrhages, Perinatal//Subarachnoid Hemorrhage, Intracranial//Hemorrhage, Intracranial Subarachnoid//Hemorrhages, Intracranial Subarachnoid//Intracranial Subarachnoid Hemorrhage//Intracranial Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Intracranial

Expression Detail

GEO ID:	GSE121868
Description:	Profiles of Extracellular RNA in Cerebrospinal Fluid and Plasma from Subarachnoid Hemorrhage Patients
Experimental Design:	Disease Sample Source
Case Disease Type:	Subarachnoid Hemorrhage
Case Disease SubType:	NA
Case Sample:	Subarachnoid Hemorrhage
Control Sample:	Blood Plasma
Number of Case:	257
Number of Control:	266
Number of Samples:	523

Regulatory Relationship

mRNA targets:

Gene Symbol	Chromosome	Start Site(bp)	End Site(bp)	Strand
ABI2	chr2	203328239	203447728	+
ABLIM1	chr10	114431113	114768061	-
AC010616.1	chr19	41956879	41994232	-
AC018523.2	chr11	14493783	14520344	-
ACAD10	chr12	111686056	111757107	+
ACTA1	chr1	229431245	229434098	-
ACTB	chr7	5527148	5563784	-
ACTN4	chr19	38647649	38731589	+
ACTR1A	chr10	102461881	102502712	-
AD000671.1	chr19	35745678	35754519	+
ADAM19	chr5	157395534	157575775	-
ADCY6	chr12	48766194	48789037	-
ADGRE1	chr19	6887566	6940459	+
AK4	chr1	65147549	65232145	+
ALDH16A1	chr19	49453225	49471050	+
ALDOA	chr16	30064164	30070457	+

miRNA targets:

miRNA Symbol	Chromosome	Start Site(bp)	End Site(bp)	Strand
hsa-miR-25-3p	chr7	100093571	100093592	-
hsa-miR-214-3p	chr1	172138816	172138837	-
hsa-miR-27b-3p	chr9	95085505	95085525	+
hsa-miR-185-5p	chr22	20033153	20033174	+
hsa-miR-485-5p	chr14	101055427	101055448	+
hsa-miR-650	chr22	22822791	22822811	+
hsa-miR-423-5p	chr17	30117095	30117117	+
hsa-miR-3609	chr7	98881700	98881723	+
hsa-miR-6819-3p	chr22	36286847	36286867	-

circRNA targets:

lncRNA targets:

lncRNA Symbol	Chromosome	Start Site(bp)	End Site(bp)	Strand
AC005899.4	chr17	32328441	32329395	+
AC016876.2	chr17	7581964	7584086	-
AC019080.1	chr2	177283508	177392691	-
AC026362.1	chr12	122975320	122982907	+
AC051619.7	chr15	45200325	45200632	-
AC106864.1	chr4	112693047	112706810	-
AC245014.3	chr1	145281116	145281462	+
AD000090.1	chr19	35557956	35581954	+

Display:

Experiment Detail

GEO ID:	GSE121868
Sample Source:	Blood
Source Fraction:	Plasma
Platform:	GPL11154
Method:	NGS
Num of detected RNA Type:	5
Num of detected RNAs of this Type:	17671
Sample treatment protocol:	NA
RNA Extract protocol:	total RNA RNA was isolated using MiRVana Paris (Ambion).
RNA library preparation protocol:	TruSeq Small RNA library prep kit (Illumina) was used. Samples were not multiplexed. Strand specificity is non-stranded. Type of starting material is total RNA.

Reference