Entry Detail



General Information

Database ID:exR0219302
RNA Name:PGAM1
RNA Type:mRNA
Chromosome:chr10
Starnd:+
Coordinate:
Start Site(bp):97426191End Site(bp):97433444
External Links:ENSG00000171314



Disease Information

Disease Name:Subarachnoid Hemorrhage
Disease Category:Nervous System Diseases
MeSH ID:D013345
Type:Diseases Category/Nervous System Diseases
Alias:SAH (Subarachnoid Hemorrhage)//SAHs (Subarachnoid Hemorrhage)//Hemorrhage, Subarachnoid//Hemorrhages, Subarachnoid//Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Aneurysmal//Aneurysmal Subarachnoid Hemorrhage//Aneurysmal Subarachnoid Hemorrhages//Hemorrhage, Aneurysmal Subarachnoid//Hemorrhages, Aneurysmal Subarachnoid//Subarachnoid Hemorrhages, Aneurysmal//Subarachnoid Hemorrhage, Spontaneous//Hemorrhage, Spontaneous Subarachnoid//Hemorrhages, Spontaneous Subarachnoid//Spontaneous Subarachnoid Hemorrhage//Spontaneous Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Spontaneous//Perinatal Subarachnoid Hemorrhage//Hemorrhage, Perinatal Subarachnoid//Hemorrhages, Perinatal Subarachnoid//Perinatal Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Perinatal//Subarachnoid Hemorrhages, Perinatal//Subarachnoid Hemorrhage, Intracranial//Hemorrhage, Intracranial Subarachnoid//Hemorrhages, Intracranial Subarachnoid//Intracranial Subarachnoid Hemorrhage//Intracranial Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Intracranial



Expression Detail

GEO ID:GSE121868
Description:Profiles of Extracellular RNA in Cerebrospinal Fluid and Plasma from Subarachnoid Hemorrhage Patients
Experimental Design:Disease Sample Source
Case Disease Type:Subarachnoid Hemorrhage
Case Disease SubType:NA
Case Sample:Subarachnoid Hemorrhage
Control Sample:Blood Plasma
Number of Case:257
Number of Control:266
Number of Samples:523





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AASDHPPT
chr11
106075501
106098699
+
ABCB6
chr2
219209772
219218994
-
ABHD17C
chr15
80679684
80755621
+
ABI2
chr2
203328239
203447728
+
ABL2
chr1
179099330
179229684
-
AC007846.2
chr17
5772926
6080792
+
AC073082.1
chr2
48632291
48755724
-
AC091959.3
chr5
146203550
146339251
+
AC110275.1
chr8
43018424
43077334
+
AC139530.2
chr17
81703371
81720539
+
AC245033.1
chr15
82536788
82573194
-
ACACA
chr17
37084992
37406836
-
ACAT2
chr6
159762045
159779112
+
ACBD7
chr10
15075475
15088776
-
ACTB
chr7
5527148
5563784
-
ACTR1A
chr10
102461881
102502712
-
ACTR1B
chr2
97655939
97664044
-
ADA
chr20
44619522
44652233
-
ADAR
chr1
154582057
154628013
-
ADD2
chr2
70607618
70768225
-
AFAP1
chr4
7758714
7939926
-
AGBL5
chr2
27042364
27070622
+
AKT2
chr19
40230317
40285536
-
AL024498.2
chr6
10747794
10930423
+
AL157392.5
chr10
13610047
13655929
+
ALDH18A1
chr10
95605941
95656711
-
ALDOA
chr16
30064164
30070457
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-423-5p
chr17
30117095
30117117
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC009022.1
chr16
69976297
70065948
-
AC026461.1
chr16
56682470
56687807
+
AC245033.4
chr15
82533175
82540008
-
AL022311.1
chr22
37876148
37895563
+
Display:



Experiment Detail

GEO ID:GSE121868
Sample Source:Blood
Source Fraction:Plasma
Platform:GPL11154
Method:NGS
Num of detected RNA Type:5
Num of detected RNAs of this Type:17671
Sample treatment protocol:NA
RNA Extract protocol:total RNA RNA was isolated using MiRVana Paris (Ambion).
RNA library preparation protocol:TruSeq Small RNA library prep kit (Illumina) was used. Samples were not multiplexed. Strand specificity is non-stranded. Type of starting material is total RNA.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA