Entry Detail



General Information

Database ID:exR0220292
RNA Name:PTMA
RNA Type:mRNA
Chromosome:chr2
Starnd:+
Coordinate:
Start Site(bp):231706895End Site(bp):231713541
External Links:ENSG00000187514



Disease Information

Disease Name:Subarachnoid Hemorrhage
Disease Category:Nervous System Diseases
MeSH ID:D013345
Type:Diseases Category/Nervous System Diseases
Alias:SAH (Subarachnoid Hemorrhage)//SAHs (Subarachnoid Hemorrhage)//Hemorrhage, Subarachnoid//Hemorrhages, Subarachnoid//Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Aneurysmal//Aneurysmal Subarachnoid Hemorrhage//Aneurysmal Subarachnoid Hemorrhages//Hemorrhage, Aneurysmal Subarachnoid//Hemorrhages, Aneurysmal Subarachnoid//Subarachnoid Hemorrhages, Aneurysmal//Subarachnoid Hemorrhage, Spontaneous//Hemorrhage, Spontaneous Subarachnoid//Hemorrhages, Spontaneous Subarachnoid//Spontaneous Subarachnoid Hemorrhage//Spontaneous Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Spontaneous//Perinatal Subarachnoid Hemorrhage//Hemorrhage, Perinatal Subarachnoid//Hemorrhages, Perinatal Subarachnoid//Perinatal Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Perinatal//Subarachnoid Hemorrhages, Perinatal//Subarachnoid Hemorrhage, Intracranial//Hemorrhage, Intracranial Subarachnoid//Hemorrhages, Intracranial Subarachnoid//Intracranial Subarachnoid Hemorrhage//Intracranial Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Intracranial



Expression Detail

GEO ID:GSE121868
Description:Profiles of Extracellular RNA in Cerebrospinal Fluid and Plasma from Subarachnoid Hemorrhage Patients
Experimental Design:Disease Sample Source
Case Disease Type:Subarachnoid Hemorrhage
Case Disease SubType:NA
Case Sample:Subarachnoid Hemorrhage
Control Sample:Blood Plasma
Number of Case:257
Number of Control:266
Number of Samples:523





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC131160.1
chr3
183815568
183884889
-
AL590764.2
chrX
71103987
71111575
-
ACTR2
chr2
65227753
65271253
+
AC006030.1
chr2
74211604
74363377
-
AC008763.3
chr19
7678501
7682854
+
AC120057.2
chr17
7240427
7244635
-
AC092647.5
chr7
55887277
55955239
+
ABHD5
chr3
43690108
43734371
+
ADRA2C
chr4
3766348
3768526
+
ABT1
chr6
26596953
26600739
+
ADNP2
chr18
80109262
80147523
+
AC139530.2
chr17
81703371
81720539
+
AL358113.1
chr9
69035747
69255187
+
AC068946.1
chr2
219075329
219170827
-
AKAP8L
chr19
15380050
15419141
-
AL603832.3
chr1
112702614
112711433
-
ACAA2
chr18
49782164
49813953
-
ALDH18A1
chr10
95605941
95656711
-
AC009690.1
chr15
72284727
72375981
-
AL136454.1
chr1
192716132
192716653
+
ACTR1B
chr2
97655939
97664044
-
AGO1
chr1
35869808
35930532
+
ADGRA3
chr4
22345071
22516066
-
ADAM17
chr2
9488486
9556732
-
ABCF3
chr3
184186023
184194012
+
AC093323.1
chr4
6663396
6676755
+
AKR1A1
chr1
45550543
45570049
+
ADO
chr10
62804720
62808479
+
AC068547.1
chr2
151802651
151973949
-
ABL2
chr1
179099330
179229684
-
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-483-5p
chr11
2134181
2134202
-
hsa-miR-25-5p
chr7
100093610
100093630
-
hsa-miR-1244
chr2
231713368
231713393
+
hsa-miR-3652
chr12
103930425
103930442
+
hsa-miR-3960
chr9
127785879
127785898
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC005083.1
chr7
20217577
20221700
+
AC007743.1
chr2
56173534
56185870
-
AC007952.4
chr17
19112000
19112636
-
AC008771.1
chr5
80411231
80488095
-
AC009022.1
chr16
69976297
70065948
-
AC012485.1
chr2
238231684
238255633
+
AC012615.1
chr19
1874871
1876169
-
AC016876.2
chr17
7581964
7584086
-
AC018521.1
chr17
47945424
47981736
+
AC026362.1
chr12
122975320
122982907
+
AC061975.1
chr17
28263634
28266369
-
AC068473.5
chr18
79677287
79679358
-
AC092755.2
chr15
59688517
59689418
+
AC116407.1
chr17
32141226
32143135
-
AC245033.4
chr15
82533175
82540008
-
AL121992.1
chr1
15586136
15603626
-
AL137003.1
chr6
16764346
16766883
+
AL137782.1
chr13
75549773
75807120
+
Display:



Experiment Detail

GEO ID:GSE121868
Sample Source:Blood
Source Fraction:Plasma
Platform:GPL11154
Method:NGS
Num of detected RNA Type:5
Num of detected RNAs of this Type:17671
Sample treatment protocol:NA
RNA Extract protocol:total RNA RNA was isolated using MiRVana Paris (Ambion).
RNA library preparation protocol:TruSeq Small RNA library prep kit (Illumina) was used. Samples were not multiplexed. Strand specificity is non-stranded. Type of starting material is total RNA.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA