Entry Detail



General Information

Database ID:exR0221063
RNA Name:RPL13
RNA Type:mRNA
Chromosome:chr16
Starnd:+
Coordinate:
Start Site(bp):89560657End Site(bp):89566828
External Links:ENSG00000167526



Disease Information

Disease Name:Subarachnoid Hemorrhage
Disease Category:Nervous System Diseases
MeSH ID:D013345
Type:Diseases Category/Nervous System Diseases
Alias:SAH (Subarachnoid Hemorrhage)//SAHs (Subarachnoid Hemorrhage)//Hemorrhage, Subarachnoid//Hemorrhages, Subarachnoid//Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Aneurysmal//Aneurysmal Subarachnoid Hemorrhage//Aneurysmal Subarachnoid Hemorrhages//Hemorrhage, Aneurysmal Subarachnoid//Hemorrhages, Aneurysmal Subarachnoid//Subarachnoid Hemorrhages, Aneurysmal//Subarachnoid Hemorrhage, Spontaneous//Hemorrhage, Spontaneous Subarachnoid//Hemorrhages, Spontaneous Subarachnoid//Spontaneous Subarachnoid Hemorrhage//Spontaneous Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Spontaneous//Perinatal Subarachnoid Hemorrhage//Hemorrhage, Perinatal Subarachnoid//Hemorrhages, Perinatal Subarachnoid//Perinatal Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Perinatal//Subarachnoid Hemorrhages, Perinatal//Subarachnoid Hemorrhage, Intracranial//Hemorrhage, Intracranial Subarachnoid//Hemorrhages, Intracranial Subarachnoid//Intracranial Subarachnoid Hemorrhage//Intracranial Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Intracranial



Expression Detail

GEO ID:GSE121868
Description:Profiles of Extracellular RNA in Cerebrospinal Fluid and Plasma from Subarachnoid Hemorrhage Patients
Experimental Design:Disease Sample Source
Case Disease Type:Subarachnoid Hemorrhage
Case Disease SubType:NA
Case Sample:Subarachnoid Hemorrhage
Control Sample:Blood Plasma
Number of Case:257
Number of Control:266
Number of Samples:523





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AGFG2
chr7
100539203
100568220
+
AC009690.1
chr15
72284727
72375981
-
ADO
chr10
62804720
62808479
+
AC008763.2
chr19
7629796
7643048
+
ALDH5A1
chr6
24494867
24537207
+
AK4
chr1
65147549
65232145
+
AGAP1
chr2
235494043
236131800
+
AAAS
chr12
53307456
53324864
-
AL136454.1
chr1
192716132
192716653
+
AL590132.1
chr1
210858125
211134146
-
ACTB
chr7
5527148
5563784
-
AC011455.2
chr19
38915404
38949855
-
ACAT2
chr6
159762045
159779112
+
ABCD3
chr1
94418389
94518666
+
AHCYL1
chr1
109984765
110023742
+
AK2
chr1
33007940
33080996
-
ACP1
chr2
264140
278283
+
AC004922.1
chr7
99325879
99394653
+
ADPRHL2
chr1
36088892
36093932
+
AARS2
chr6
44298731
44313347
-
AC006030.1
chr2
74211604
74363377
-
AIFM2
chr10
70098223
70132934
-
ACADM
chr1
75724347
75787575
+
AC026464.4
chr16
69299682
69322700
+
ADCY3
chr2
24819169
24919839
-
ACTR3
chr2
113890063
113962596
+
ADPGK
chr15
72751369
72785846
-
ACOT7
chr1
6264269
6394391
-
AKIRIN1
chr1
38991276
39006059
+
ALDH2
chr12
111766887
111817532
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-29c-3p
chr1
207801865
207801886
-
hsa-miR-4426
chr1
192716333
192716349
+
hsa-miR-4485-3p
chr11
10508277
10508296
-
hsa-miR-4521
chr17
8186948
8186969
+
hsa-miR-6716-3p
chr11
118644048
118644069
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC002116.1
chr19
36008638
36014235
-
AC007952.4
chr17
19112000
19112636
-
AC009022.1
chr16
69976297
70065948
-
AC010542.4
chr16
66549280
66551189
+
AC011632.1
chr8
74798784
74866939
-
AC016747.1
chr2
61141592
61144969
-
AC020928.2
chr19
36773712
36775908
-
AC026362.1
chr12
122975320
122982907
+
AC026401.3
chr16
15701237
15702118
+
AC068768.1
chr12
123262060
123262402
+
AC091564.7
chr11
6610883
6616594
-
AC092143.3
chr16
89906157
89918233
+
AC100810.1
chr8
1761054
1764508
-
AC132217.1
chr11
2129121
2129964
-
AC133644.3
chr2
87455476
87767359
+
AC139149.1
chr17
81514047
81527776
+
AC215522.2
chr7
19018
35489
-
AC245014.3
chr1
145281116
145281462
+
AC245033.4
chr15
82533175
82540008
-
AD000090.1
chr19
35557956
35581954
+
AF106564.1
chr8
24912165
24914717
-
AL022311.1
chr22
37876148
37895563
+
AL022341.1
chr16
648473
649200
-
Display:



Experiment Detail

GEO ID:GSE121868
Sample Source:Blood
Source Fraction:Plasma
Platform:GPL11154
Method:NGS
Num of detected RNA Type:5
Num of detected RNAs of this Type:17671
Sample treatment protocol:NA
RNA Extract protocol:total RNA RNA was isolated using MiRVana Paris (Ambion).
RNA library preparation protocol:TruSeq Small RNA library prep kit (Illumina) was used. Samples were not multiplexed. Strand specificity is non-stranded. Type of starting material is total RNA.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA