Entry Detail



General Information

Database ID:exR0221131
RNA Name:RPS13
RNA Type:mRNA
Chromosome:chr11
Starnd:-
Coordinate:
Start Site(bp):17074388End Site(bp):17077715
External Links:ENSG00000110700



Disease Information

Disease Name:Subarachnoid Hemorrhage
Disease Category:Nervous System Diseases
MeSH ID:D013345
Type:Diseases Category/Nervous System Diseases
Alias:SAH (Subarachnoid Hemorrhage)//SAHs (Subarachnoid Hemorrhage)//Hemorrhage, Subarachnoid//Hemorrhages, Subarachnoid//Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Aneurysmal//Aneurysmal Subarachnoid Hemorrhage//Aneurysmal Subarachnoid Hemorrhages//Hemorrhage, Aneurysmal Subarachnoid//Hemorrhages, Aneurysmal Subarachnoid//Subarachnoid Hemorrhages, Aneurysmal//Subarachnoid Hemorrhage, Spontaneous//Hemorrhage, Spontaneous Subarachnoid//Hemorrhages, Spontaneous Subarachnoid//Spontaneous Subarachnoid Hemorrhage//Spontaneous Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Spontaneous//Perinatal Subarachnoid Hemorrhage//Hemorrhage, Perinatal Subarachnoid//Hemorrhages, Perinatal Subarachnoid//Perinatal Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Perinatal//Subarachnoid Hemorrhages, Perinatal//Subarachnoid Hemorrhage, Intracranial//Hemorrhage, Intracranial Subarachnoid//Hemorrhages, Intracranial Subarachnoid//Intracranial Subarachnoid Hemorrhage//Intracranial Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Intracranial



Expression Detail

GEO ID:GSE121868
Description:Profiles of Extracellular RNA in Cerebrospinal Fluid and Plasma from Subarachnoid Hemorrhage Patients
Experimental Design:Disease Sample Source
Case Disease Type:Subarachnoid Hemorrhage
Case Disease SubType:NA
Case Sample:Subarachnoid Hemorrhage
Control Sample:Blood Plasma
Number of Case:257
Number of Control:266
Number of Samples:523





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC007192.1
chr19
18153158
18178117
+
AC008764.1
chr19
16479067
16628204
-
AC010323.1
chr19
8308283
8321379
-
AC015813.2
chr17
57989038
58007246
-
ACAD9
chr3
128879596
128916067
+
ACAT2
chr6
159762045
159779112
+
ACTG1
chr17
81509971
81523847
-
ACTR2
chr2
65227753
65271253
+
ADD1
chr4
2843857
2930076
+
ADGRL1
chr19
14147743
14206187
-
ADK
chr10
74151202
74709963
+
ADSL
chr22
40346500
40390463
+
AGO2
chr8
140520156
140635633
-
AHCYL1
chr1
109984765
110023742
+
AHNAK
chr11
62433542
62556235
-
AHSA1
chr14
77457870
77469472
+
AKAP8
chr19
15353385
15379798
-
AKAP9
chr7
91940867
92110673
+
AKT1
chr14
104769349
104795751
-
AL022238.4
chr22
40346529
40410054
+
AL049629.2
chr11
33698261
33722467
-
ALDOA
chr16
30064164
30070457
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-3651
chr9
92292461
92292484
-
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC073389.1
chr10
73625996
73626790
+
AC113189.4
chr17
7439506
7445966
+
AL033543.1
chr22
44102779
44116232
+
Display:



Experiment Detail

GEO ID:GSE121868
Sample Source:Blood
Source Fraction:Plasma
Platform:GPL11154
Method:NGS
Num of detected RNA Type:5
Num of detected RNAs of this Type:17671
Sample treatment protocol:NA
RNA Extract protocol:total RNA RNA was isolated using MiRVana Paris (Ambion).
RNA library preparation protocol:TruSeq Small RNA library prep kit (Illumina) was used. Samples were not multiplexed. Strand specificity is non-stranded. Type of starting material is total RNA.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA