Entry Detail



General Information

Database ID:exR0221152
RNA Name:RPS3
RNA Type:mRNA
Chromosome:chr11
Starnd:+
Coordinate:
Start Site(bp):75399515End Site(bp):75422280
External Links:ENSG00000149273



Disease Information

Disease Name:Subarachnoid Hemorrhage
Disease Category:Nervous System Diseases
MeSH ID:D013345
Type:Diseases Category/Nervous System Diseases
Alias:SAH (Subarachnoid Hemorrhage)//SAHs (Subarachnoid Hemorrhage)//Hemorrhage, Subarachnoid//Hemorrhages, Subarachnoid//Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Aneurysmal//Aneurysmal Subarachnoid Hemorrhage//Aneurysmal Subarachnoid Hemorrhages//Hemorrhage, Aneurysmal Subarachnoid//Hemorrhages, Aneurysmal Subarachnoid//Subarachnoid Hemorrhages, Aneurysmal//Subarachnoid Hemorrhage, Spontaneous//Hemorrhage, Spontaneous Subarachnoid//Hemorrhages, Spontaneous Subarachnoid//Spontaneous Subarachnoid Hemorrhage//Spontaneous Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Spontaneous//Perinatal Subarachnoid Hemorrhage//Hemorrhage, Perinatal Subarachnoid//Hemorrhages, Perinatal Subarachnoid//Perinatal Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Perinatal//Subarachnoid Hemorrhages, Perinatal//Subarachnoid Hemorrhage, Intracranial//Hemorrhage, Intracranial Subarachnoid//Hemorrhages, Intracranial Subarachnoid//Intracranial Subarachnoid Hemorrhage//Intracranial Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Intracranial



Expression Detail

GEO ID:GSE121868
Description:Profiles of Extracellular RNA in Cerebrospinal Fluid and Plasma from Subarachnoid Hemorrhage Patients
Experimental Design:Disease Sample Source
Case Disease Type:Subarachnoid Hemorrhage
Case Disease SubType:NA
Case Sample:Subarachnoid Hemorrhage
Control Sample:Blood Plasma
Number of Case:257
Number of Control:266
Number of Samples:523





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AL022238.4
chr22
40346529
40410054
+
ADSL
chr22
40346500
40390463
+
AC007192.1
chr19
18153158
18178117
+
ADAR
chr1
154582057
154628013
-
ADNP
chr20
50888916
50931437
-
AK4
chr1
65147549
65232145
+
ADPGK
chr15
72751369
72785846
-
AL136454.1
chr1
192716132
192716653
+
ACIN1
chr14
23058564
23095614
-
ACBD5
chr10
27195214
27242130
-
AL928654.3
chr14
105487199
105492267
+
AL133352.1
chr10
100505628
100529881
-
ACO2
chr22
41469117
41528989
+
AKAP1
chr17
57085092
57121346
+
ACSL5
chr10
112374018
112428380
+
AC008764.4
chr19
16577642
16660115
-
AC068580.4
chr11
1734821
1763954
-
AHSA1
chr14
77457870
77469472
+
AKAP8L
chr19
15380050
15419141
-
ABCF2
chr7
151207837
151227166
-
AGPAT1
chr6
32168212
32178096
-
ADH5
chr4
99070978
99088801
-
ACTB
chr7
5527148
5563784
-
AC002985.1
chr19
18907013
18934397
-
AC004832.3
chr22
30409255
30428990
+
ABCG2
chr4
88090150
88231628
-
AK2
chr1
33007940
33080996
-
AGRN
chr1
1020120
1056118
+
ADORA2A
chr22
24417879
24442357
+
AKNA
chr9
114334156
114394405
-
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-92a-3p
chrX
134169544
134169565
-
hsa-miR-155-5p
chr21
25573983
25574006
+
hsa-miR-3654
chr7
133034860
133034878
-
hsa-miR-4485-3p
chr11
10508277
10508296
-
hsa-miR-6728-3p
chr1
8866502
8866522
-
hsa-miR-6793-3p
chr19
10829016
10829035
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC004865.2
chr1
35569813
35577729
-
AC005899.4
chr17
32328441
32329395
+
AC007952.4
chr17
19112000
19112636
-
AC009052.1
chr16
57461055
57462737
+
AC016026.1
chr22
17787652
17811497
-
AC016876.2
chr17
7581964
7584086
-
AC018521.1
chr17
47945424
47981736
+
AC019069.1
chr2
74832655
74833987
-
AC022182.2
chr8
60965802
60967775
-
AC023509.1
chr12
53441741
53467528
+
AC026401.3
chr16
15701237
15702118
+
AC067852.2
chr17
42552436
42554748
-
AC069281.2
chr7
100572232
100578700
-
AC079354.3
chr2
202137570
202149627
-
AC103691.1
chr15
64950916
64951435
-
AC106864.1
chr4
112693047
112706810
-
AC108134.2
chr16
3156736
3157483
-
AC116407.2
chr17
32127595
32128454
+
AC139149.1
chr17
81514047
81527776
+
AC139768.1
chr12
51201684
51202581
-
AC245014.3
chr1
145281116
145281462
+
AC245033.4
chr15
82533175
82540008
-
AC245884.11
chr19
54308915
54337168
-
AD000090.1
chr19
35557956
35581954
+
AL022311.1
chr22
37876148
37895563
+
AL132780.1
chr14
22929607
22956374
+
AL137230.2
chr14
89628921
89642671
-
Display:



Experiment Detail

GEO ID:GSE121868
Sample Source:Blood
Source Fraction:Plasma
Platform:GPL11154
Method:NGS
Num of detected RNA Type:5
Num of detected RNAs of this Type:17671
Sample treatment protocol:NA
RNA Extract protocol:total RNA RNA was isolated using MiRVana Paris (Ambion).
RNA library preparation protocol:TruSeq Small RNA library prep kit (Illumina) was used. Samples were not multiplexed. Strand specificity is non-stranded. Type of starting material is total RNA.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA