exRNAdisease

Entry Detail

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General Information

Database ID: exR0222800 RNA Name: STK4 RNA Type: mRNA Chromosome: chr20 Starnd: + Coordinate: Start Site(bp): 44966479 End Site(bp): 45080021 External Links: ENSG00000101109

Disease Information

Disease Name: Subarachnoid Hemorrhage Disease Category: Nervous System Diseases MeSH ID: D013345 Type: Diseases Category/Nervous System Diseases Alias: SAH (Subarachnoid Hemorrhage)//SAHs (Subarachnoid Hemorrhage)//Hemorrhage, Subarachnoid//Hemorrhages, Subarachnoid//Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Aneurysmal//Aneurysmal Subarachnoid Hemorrhage//Aneurysmal Subarachnoid Hemorrhages//Hemorrhage, Aneurysmal Subarachnoid//Hemorrhages, Aneurysmal Subarachnoid//Subarachnoid Hemorrhages, Aneurysmal//Subarachnoid Hemorrhage, Spontaneous//Hemorrhage, Spontaneous Subarachnoid//Hemorrhages, Spontaneous Subarachnoid//Spontaneous Subarachnoid Hemorrhage//Spontaneous Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Spontaneous//Perinatal Subarachnoid Hemorrhage//Hemorrhage, Perinatal Subarachnoid//Hemorrhages, Perinatal Subarachnoid//Perinatal Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Perinatal//Subarachnoid Hemorrhages, Perinatal//Subarachnoid Hemorrhage, Intracranial//Hemorrhage, Intracranial Subarachnoid//Hemorrhages, Intracranial Subarachnoid//Intracranial Subarachnoid Hemorrhage//Intracranial Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Intracranial

Expression Detail

GEO ID: GSE121868 Description: Profiles of Extracellular RNA in Cerebrospinal Fluid and Plasma from Subarachnoid Hemorrhage Patients Experimental Design: Disease Sample Source Case Disease Type: Subarachnoid Hemorrhage Case Disease SubType: NA Case Sample: Subarachnoid Hemorrhage Control Sample: Blood Plasma Number of Case: 257 Number of Control: 266 Number of Samples: 523

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand ABCF2 chr7 151207837 151227166 - AC245033.1 chr15 82536788 82573194 - AGPAT1 chr6 32168212 32178096 - AGTRAP chr1 11736084 11754802 + AKR1B1 chr7 134442356 134459284 - AKT3 chr1 243488233 243851079 - ALDH9A1 chr1 165662216 165698863 - miRNA targets: miRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand hsa-let-7a-5p chr9 94175962 94175983 + hsa-miR-24-3p chr9 95086064 95086085 + hsa-miR-122-5p chr18 58451088 58451109 + hsa-miR-130a-3p chr11 57641252 57641273 + hsa-miR-135a-5p chr12 97563834 97563856 + hsa-miR-138-5p chr16 56858527 56858549 + hsa-miR-130b-3p chr22 21653354 21653375 + hsa-miR-362-5p chrX 50008968 50008991 + hsa-miR-135b-5p chr1 205448361 205448383 - hsa-miR-1224-5p chr3 184241405 184241423 + hsa-miR-1276 chr15 85770548 85770567 - hsa-let-7c-5p chr21 16539838 16539859 + circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC016876.2 chr17 7581964 7584086 - AC087190.3 chr16 9104848 9113181 + AC245033.4 chr15 82533175 82540008 - Display:

Experiment Detail

GEO ID: GSE121868 Sample Source: Blood Source Fraction: Plasma Platform: GPL11154 Method: NGS Num of detected RNA Type: 5 Num of detected RNAs of this Type: 17671 Sample treatment protocol: NA RNA Extract protocol: total RNA RNA was isolated using MiRVana Paris (Ambion). RNA library preparation protocol: TruSeq Small RNA library prep kit (Illumina) was used. Samples were not multiplexed. Strand specificity is non-stranded. Type of starting material is total RNA.

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA