exRNAdisease

Entry Detail

---



General Information

Database ID: exR0223836 RNA Name: TNRC6B RNA Type: mRNA Chromosome: chr22 Starnd: + Coordinate: Start Site(bp): 40044817 End Site(bp): 40335808 External Links: ENSG00000100354

Disease Information

Disease Name: Subarachnoid Hemorrhage Disease Category: Nervous System Diseases MeSH ID: D013345 Type: Diseases Category/Nervous System Diseases Alias: SAH (Subarachnoid Hemorrhage)//SAHs (Subarachnoid Hemorrhage)//Hemorrhage, Subarachnoid//Hemorrhages, Subarachnoid//Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Aneurysmal//Aneurysmal Subarachnoid Hemorrhage//Aneurysmal Subarachnoid Hemorrhages//Hemorrhage, Aneurysmal Subarachnoid//Hemorrhages, Aneurysmal Subarachnoid//Subarachnoid Hemorrhages, Aneurysmal//Subarachnoid Hemorrhage, Spontaneous//Hemorrhage, Spontaneous Subarachnoid//Hemorrhages, Spontaneous Subarachnoid//Spontaneous Subarachnoid Hemorrhage//Spontaneous Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Spontaneous//Perinatal Subarachnoid Hemorrhage//Hemorrhage, Perinatal Subarachnoid//Hemorrhages, Perinatal Subarachnoid//Perinatal Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Perinatal//Subarachnoid Hemorrhages, Perinatal//Subarachnoid Hemorrhage, Intracranial//Hemorrhage, Intracranial Subarachnoid//Hemorrhages, Intracranial Subarachnoid//Intracranial Subarachnoid Hemorrhage//Intracranial Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Intracranial

Expression Detail

GEO ID: GSE121868 Description: Profiles of Extracellular RNA in Cerebrospinal Fluid and Plasma from Subarachnoid Hemorrhage Patients Experimental Design: Disease Sample Source Case Disease Type: Subarachnoid Hemorrhage Case Disease SubType: NA Case Sample: Subarachnoid Hemorrhage Control Sample: Blood Plasma Number of Case: 257 Number of Control: 266 Number of Samples: 523

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AC009133.6 chr16 29812261 29820092 + ADCY6 chr12 48766194 48789037 - AHI1 chr6 135283532 135497765 - miRNA targets: miRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand hsa-let-7a-5p chr9 94175962 94175983 + hsa-let-7b-5p chr22 46113691 46113712 + hsa-let-7e-5p chr19 51692793 51692814 + hsa-miR-129-5p chr7 128207876 128207896 + hsa-miR-147a chr9 120244985 120245004 - hsa-miR-34a-5p chr1 9151735 9151756 - hsa-let-7g-5p chr3 52268336 52268357 - hsa-let-7i-5p chr12 62603691 62603712 + hsa-miR-140-5p chr16 69933103 69933124 + hsa-miR-142-3p chr17 58331245 58331267 - hsa-miR-185-5p chr22 20033153 20033174 + hsa-miR-206 chr6 52144401 52144422 + hsa-miR-200a-3p chr1 1167916 1167937 + hsa-miR-34c-5p chr11 111513451 111513473 + hsa-miR-449a chr5 55170586 55170607 - hsa-miR-613 chr12 12764709 12764728 + hsa-miR-449b-5p chr5 55170706 55170727 - hsa-miR-501-3p chrX 50009772 50009793 + hsa-miR-502-3p chrX 50014649 50014670 + hsa-miR-616-3p chr12 57519183 57519204 - hsa-miR-1286 chr22 20249145 20249165 - hsa-miR-1321 chrX 85835832 85835849 + circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC004687.1 chr17 58330884 58332508 - Display:

Experiment Detail

GEO ID: GSE121868 Sample Source: Blood Source Fraction: Plasma Platform: GPL11154 Method: NGS Num of detected RNA Type: 5 Num of detected RNAs of this Type: 17671 Sample treatment protocol: NA RNA Extract protocol: total RNA RNA was isolated using MiRVana Paris (Ambion). RNA library preparation protocol: TruSeq Small RNA library prep kit (Illumina) was used. Samples were not multiplexed. Strand specificity is non-stranded. Type of starting material is total RNA.

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA