Entry Detail



General Information

Database ID:exR0223932
RNA Name:TPT1
RNA Type:mRNA
Chromosome:chr13
Starnd:-
Coordinate:
Start Site(bp):45333471End Site(bp):45341370
External Links:ENSG00000133112



Disease Information

Disease Name:Subarachnoid Hemorrhage
Disease Category:Nervous System Diseases
MeSH ID:D013345
Type:Diseases Category/Nervous System Diseases
Alias:SAH (Subarachnoid Hemorrhage)//SAHs (Subarachnoid Hemorrhage)//Hemorrhage, Subarachnoid//Hemorrhages, Subarachnoid//Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Aneurysmal//Aneurysmal Subarachnoid Hemorrhage//Aneurysmal Subarachnoid Hemorrhages//Hemorrhage, Aneurysmal Subarachnoid//Hemorrhages, Aneurysmal Subarachnoid//Subarachnoid Hemorrhages, Aneurysmal//Subarachnoid Hemorrhage, Spontaneous//Hemorrhage, Spontaneous Subarachnoid//Hemorrhages, Spontaneous Subarachnoid//Spontaneous Subarachnoid Hemorrhage//Spontaneous Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Spontaneous//Perinatal Subarachnoid Hemorrhage//Hemorrhage, Perinatal Subarachnoid//Hemorrhages, Perinatal Subarachnoid//Perinatal Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Perinatal//Subarachnoid Hemorrhages, Perinatal//Subarachnoid Hemorrhage, Intracranial//Hemorrhage, Intracranial Subarachnoid//Hemorrhages, Intracranial Subarachnoid//Intracranial Subarachnoid Hemorrhage//Intracranial Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Intracranial



Expression Detail

GEO ID:GSE121868
Description:Profiles of Extracellular RNA in Cerebrospinal Fluid and Plasma from Subarachnoid Hemorrhage Patients
Experimental Design:Disease Sample Source
Case Disease Type:Subarachnoid Hemorrhage
Case Disease SubType:NA
Case Sample:Subarachnoid Hemorrhage
Control Sample:Blood Plasma
Number of Case:257
Number of Control:266
Number of Samples:523





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ABCB4
chr7
87401697
87480435
-
AK2
chr1
33007940
33080996
-
AKAP17A
chrX
1591604
1602520
+
AARSD1
chr17
42950526
42964498
-
AGBL2
chr11
47659591
47715389
-
AC092718.8
chr16
81022316
81096284
-
AKAP1
chr17
57085092
57121346
+
ADM
chr11
10305073
10307397
+
AL136454.1
chr1
192716132
192716653
+
AAGAB
chr15
67200667
67255195
-
ACAP1
chr17
7336529
7351477
+
AC105052.1
chr7
102582523
102642869
-
AC112229.3
chr2
110402934
110473075
-
AL121594.1
chr14
35122549
35317474
+
ABR
chr17
1003518
1229738
-
AC005258.1
chr19
2269525
2341172
+
AIFM2
chr10
70098223
70132934
-
ADK
chr10
74151202
74709963
+
AL121753.1
chr20
35267885
35280043
-
ACIN1
chr14
23058564
23095614
-
AC073082.1
chr2
48632291
48755724
-
AGO4
chr1
35808016
35857890
+
AC073508.2
chr17
40627356
40665141
-
AC120057.2
chr17
7240427
7244635
-
AC010323.1
chr19
8308283
8321379
-
ACBD3
chr1
226144679
226186741
-
ADAR
chr1
154582057
154628013
-
ACTR1B
chr2
97655939
97664044
-
ACAD8
chr11
134253495
134265855
+
ADD3
chr10
109996368
110135565
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-3648
chr21
8987026
8987046
+
hsa-miR-4426
chr1
192716333
192716349
+
hsa-miR-4700-5p
chr12
120723202
120723223
+
hsa-miR-4700-3p
chr12
120723233
120723258
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC005062.1
chr7
19918981
20140453
-
AC007952.4
chr17
19112000
19112636
-
AC012321.1
chr16
69703065
69704652
+
AC012531.2
chr12
54017110
54035361
+
AC016876.2
chr17
7581964
7584086
-
AC019155.2
chr7
125229579
125264291
-
AC020663.1
chr16
4730115
4752565
-
AC026362.1
chr12
122975320
122982907
+
AC064802.1
chr8
114282067
114295839
+
AC079781.5
chr7
97851688
97972985
-
AC091564.7
chr11
6610883
6616594
-
AC113414.1
chr5
162424042
163437326
-
AC132217.1
chr11
2129121
2129964
-
AC242426.2
chr1
147172755
147295734
+
AD000090.1
chr19
35557956
35581954
+
AL022311.1
chr22
37876148
37895563
+
AL096870.2
chr14
24209646
24215987
-
AL121749.1
chr10
35604485
35608153
-
AL136295.6
chr14
24198433
24199090
+
AL137058.2
chr13
52600042
52642542
+
Display:



Experiment Detail

GEO ID:GSE121868
Sample Source:Blood
Source Fraction:Plasma
Platform:GPL11154
Method:NGS
Num of detected RNA Type:5
Num of detected RNAs of this Type:17671
Sample treatment protocol:NA
RNA Extract protocol:total RNA RNA was isolated using MiRVana Paris (Ambion).
RNA library preparation protocol:TruSeq Small RNA library prep kit (Illumina) was used. Samples were not multiplexed. Strand specificity is non-stranded. Type of starting material is total RNA.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA