Entry Detail



General Information

Database ID:exR0224328
RNA Name:TXNIP
RNA Type:mRNA
Chromosome:chr1
Starnd:-
Coordinate:
Start Site(bp):145992435End Site(bp):145996579
External Links:ENSG00000265972



Disease Information

Disease Name:Subarachnoid Hemorrhage
Disease Category:Nervous System Diseases
MeSH ID:D013345
Type:Diseases Category/Nervous System Diseases
Alias:SAH (Subarachnoid Hemorrhage)//SAHs (Subarachnoid Hemorrhage)//Hemorrhage, Subarachnoid//Hemorrhages, Subarachnoid//Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Aneurysmal//Aneurysmal Subarachnoid Hemorrhage//Aneurysmal Subarachnoid Hemorrhages//Hemorrhage, Aneurysmal Subarachnoid//Hemorrhages, Aneurysmal Subarachnoid//Subarachnoid Hemorrhages, Aneurysmal//Subarachnoid Hemorrhage, Spontaneous//Hemorrhage, Spontaneous Subarachnoid//Hemorrhages, Spontaneous Subarachnoid//Spontaneous Subarachnoid Hemorrhage//Spontaneous Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Spontaneous//Perinatal Subarachnoid Hemorrhage//Hemorrhage, Perinatal Subarachnoid//Hemorrhages, Perinatal Subarachnoid//Perinatal Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Perinatal//Subarachnoid Hemorrhages, Perinatal//Subarachnoid Hemorrhage, Intracranial//Hemorrhage, Intracranial Subarachnoid//Hemorrhages, Intracranial Subarachnoid//Intracranial Subarachnoid Hemorrhage//Intracranial Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Intracranial



Expression Detail

GEO ID:GSE121868
Description:Profiles of Extracellular RNA in Cerebrospinal Fluid and Plasma from Subarachnoid Hemorrhage Patients
Experimental Design:Disease Sample Source
Case Disease Type:Subarachnoid Hemorrhage
Case Disease SubType:NA
Case Sample:Subarachnoid Hemorrhage
Control Sample:Blood Plasma
Number of Case:257
Number of Control:266
Number of Samples:523





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AASDHPPT
chr11
106075501
106098699
+
AC135050.2
chr16
31083439
31094956
-
ACTA1
chr1
229431245
229434098
-
ACTG1
chr17
81509971
81523847
-
ADAR
chr1
154582057
154628013
-
ADCK2
chr7
140672945
140696261
+
AGO3
chr1
35930718
36072500
+
AHCY
chr20
34280268
34311802
-
AL121753.1
chr20
35267885
35280043
-
AL136295.5
chr14
24147548
24166452
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-302a-3p
chr4
112648186
112648208
-
hsa-miR-302b-3p
chr4
112648489
112648511
-
hsa-miR-302c-3p
chr4
112648366
112648388
-
hsa-miR-302d-3p
chr4
112648006
112648028
-
hsa-miR-302e
chr11
7234771
7234787
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC007952.4
chr17
19112000
19112636
-
AC010655.4
chr7
128455840
128493859
+
AC245014.3
chr1
145281116
145281462
+
Display:



Experiment Detail

GEO ID:GSE121868
Sample Source:Blood
Source Fraction:Plasma
Platform:GPL11154
Method:NGS
Num of detected RNA Type:5
Num of detected RNAs of this Type:17671
Sample treatment protocol:NA
RNA Extract protocol:total RNA RNA was isolated using MiRVana Paris (Ambion).
RNA library preparation protocol:TruSeq Small RNA library prep kit (Illumina) was used. Samples were not multiplexed. Strand specificity is non-stranded. Type of starting material is total RNA.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA