exRNAdisease

Entry Detail

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General Information

Database ID: exR0259421 RNA Name: hsa-miR-30e-5p RNA Type: miRNA Chromosome: chr1 Starnd: + Coordinate: Start Site(bp): 40754371 End Site(bp): 40754392 External Links: hsa-miR-30e-5p

Disease Information

Disease Name: Chronic Pancreatitis Disease Category: Digestive System Diseases MeSH ID: D050500 Type: Diseases Category/Digestive System Diseases Alias: Pancreatitis, Chronic//Chronic Pancreatitis

Expression Detail

GEO ID: GSE128508 Description: Comprehensive analysis of exosomal miRNA in type 1 autoimmune pancreatitis Experimental Design: Disease vs Control Case Disease Type: Chronic Pancreatitis Case Disease SubType: NA Case Sample: Chronic Pancreatitis Control Sample: Healthy Number of Case: 10 Number of Control: 10 Number of Samples: 20

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand CHD1 chr5 98853985 98928957 - TBPL1 chr6 133952170 133990432 + miRNA targets: NA circRNA targets: circRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand hsa_circ_0000540 chr14 55799534 55821940 + hsa_circ_0000384 chr12 27867712 27877119 + hsa_circ_0001168 chr20 47691321 47707559 + hsa_circ_0001146 chr20 34241449 34246936 - lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC005034.3 chr2 75697583 75697996 + AC008124.1 chr12 45718046 45727775 - AC012236.1 chr15 31221999 31230838 - AC021078.1 chr5 149494314 149504670 - AL049840.4 chr14 103694516 103695050 - AL137129.1 chr14 61734138 61776260 + DLEU2 chr13 49956670 50125720 - MALAT1 chr11 65497688 65506516 + NEAT1 chr11 65422774 65445540 + NORAD chr20 36045618 36051018 - OIP5-AS1 chr15 41283990 41309737 + SNHG16 chr17 76557764 76565348 + XIST chrX 73820649 73852723 - Display:

Experiment Detail

GEO ID: GSE128508 Sample Source: Blood Source Fraction: Exosome Platform: GPL21263 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 1958 Sample treatment protocol: Exosomes were isolated using the ExoQuick exosome precipitation kit. RNA Extract protocol: total RNA was extracted from cells using miRNesy mini kit (Qiagen). RNA library preparation protocol: Extracted total RNA was labeled with Cy5 using the 3D-Gene miRNA labeling kit (Toray, Kamakura, Japan).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA