exRNAdisease

Entry Detail

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General Information

Database ID: exR0259835 RNA Name: hsa-miR-485-3p RNA Type: miRNA Chromosome: chr14 Starnd: + Coordinate: Start Site(bp): 101055464 End Site(bp): 101055485 External Links: hsa-miR-485-3p

Disease Information

Disease Name: Chronic Pancreatitis Disease Category: Digestive System Diseases MeSH ID: D050500 Type: Diseases Category/Digestive System Diseases Alias: Pancreatitis, Chronic//Chronic Pancreatitis

Expression Detail

GEO ID: GSE128508 Description: Comprehensive analysis of exosomal miRNA in type 1 autoimmune pancreatitis Experimental Design: Disease vs Control Case Disease Type: Chronic Pancreatitis Case Disease SubType: NA Case Sample: Chronic Pancreatitis Control Sample: Healthy Number of Case: 10 Number of Control: 10 Number of Samples: 20

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand GAPVD1 chr9 125261794 125367207 + LRP8 chr1 53242364 53328469 - VPS45 chr1 150067279 150145329 + miRNA targets: NA circRNA targets: circRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand hsa_circ_0000540 chr14 55799534 55821940 + hsa_circ_0001605 chr6 42903447 42905047 + lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC005082.1 chr7 23205787 23208045 + AC016876.2 chr17 7581964 7584086 - AL355075.4 chr14 20343048 20343685 - ARHGAP27P1-BPTFP1-KPNA2P3 chr17 64749663 64781707 - HCG11 chr6 26521709 26527404 + LINC00461 chr5 88507546 88691057 - MALAT1 chr11 65497688 65506516 + MEG8 chr14 100894770 101038859 + MIR155HG chr21 25561909 25575168 + NEAT1 chr11 65422774 65445540 + NORAD chr20 36045618 36051018 - OIP5-AS1 chr15 41283990 41309737 + SNHG6 chr8 66921684 66926398 - TUG1 chr22 30969245 30979395 + XIST chrX 73820649 73852723 - Display:

Experiment Detail

GEO ID: GSE128508 Sample Source: Blood Source Fraction: Exosome Platform: GPL21263 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 1958 Sample treatment protocol: Exosomes were isolated using the ExoQuick exosome precipitation kit. RNA Extract protocol: total RNA was extracted from cells using miRNesy mini kit (Qiagen). RNA library preparation protocol: Extracted total RNA was labeled with Cy5 using the 3D-Gene miRNA labeling kit (Toray, Kamakura, Japan).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA