exRNAdisease

Entry Detail

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General Information

Database ID: exR0259876 RNA Name: hsa-miR-520d-5p RNA Type: miRNA Chromosome: chr19 Starnd: + Coordinate: Start Site(bp): 53720111 End Site(bp): 53720130 External Links: hsa-miR-520d-5p

Disease Information

Disease Name: Chronic Pancreatitis Disease Category: Digestive System Diseases MeSH ID: D050500 Type: Diseases Category/Digestive System Diseases Alias: Pancreatitis, Chronic//Chronic Pancreatitis

Expression Detail

GEO ID: GSE128508 Description: Comprehensive analysis of exosomal miRNA in type 1 autoimmune pancreatitis Experimental Design: Disease vs Control Case Disease Type: Chronic Pancreatitis Case Disease SubType: NA Case Sample: Chronic Pancreatitis Control Sample: Healthy Number of Case: 10 Number of Control: 10 Number of Samples: 20

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AFF3 chr2 99545419 100192428 - KLHL28 chr14 44924319 45042322 - SIK2 chr11 111602449 111730855 + UBE2J1 chr6 89326625 89352722 - miRNA targets: NA circRNA targets: circRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand hsa_circ_0000095 chr1 95609446 95616975 + hsa_circ_0000284 chr11 33307958 33309057 + hsa_circ_0001146 chr20 34241449 34246936 - hsa_circ_0000799 chr17 65941524 65972074 + lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC008738.7 chr19 33207129 33207639 + AC009022.1 chr16 69976297 70065948 - AC021078.1 chr5 149494314 149504670 - AC024940.6 chr12 31280422 31280895 - AC068768.1 chr12 123262060 123262402 + AC125257.1 chr17 41848518 41851447 - AC239868.1 chr1 149861271 149862504 + AL031595.3 chr22 44139365 44153626 + AL137129.1 chr14 61734138 61776260 + FGD5-AS1 chr3 14920347 14948424 - GAS5 chr1 173858559 173868882 - MCM3AP-AS1 chr21 46229196 46259390 + MIR29B2CHG chr1 207801518 207879115 - NEAT1 chr11 65422774 65445540 + NORAD chr20 36045618 36051018 - PITPNA-AS1 chr17 1516931 1518096 + SCARNA9 chr11 93721513 93721865 + XIST chrX 73820649 73852723 - Display:

Experiment Detail

GEO ID: GSE128508 Sample Source: Blood Source Fraction: Exosome Platform: GPL21263 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 1958 Sample treatment protocol: Exosomes were isolated using the ExoQuick exosome precipitation kit. RNA Extract protocol: total RNA was extracted from cells using miRNesy mini kit (Qiagen). RNA library preparation protocol: Extracted total RNA was labeled with Cy5 using the 3D-Gene miRNA labeling kit (Toray, Kamakura, Japan).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA