Entry Detail



General Information

Database ID:exR0260548
RNA Name:hsa-miR-296-5p
RNA Type:miRNA
Chromosome:chr20
Starnd:-
Coordinate:
Start Site(bp):58817661End Site(bp):58817681
External Links:hsa-miR-296-5p



Disease Information

Disease Name:Type 1 Autoimmune Pancreatitis
Disease Category:Digestive System Diseases
MeSH ID:D000081012
Type:Diseases Category/Digestive System Diseases
Alias:Autoimmune Pancreatitis//Autoimmune Pancreatitides//Pancreatitis, Autoimmune//Type 1 Autoimmune Pancreatitis//IgG4-related Pancreatitis//IgG4 related Pancreatitis//IgG4-related Pancreatitides//Pancreatitis, IgG4-related//Type 1 AIP//Type 2 Autoimmune Pancreatitis//Type 2 AIP//Idiopathic Duct-centric Pancreatitis//Duct-centric Pancreatitis, Idiopathic//Idiopathic Duct centric Pancreatitis//Idiopathic Duct-centric Pancreatitides//Pancreatitis, Idiopathic Duct-centric



Expression Detail

GEO ID:GSE128508
Description:Comprehensive analysis of exosomal miRNA in type 1 autoimmune pancreatitis
Experimental Design:Disease vs Control
Case Disease Type:Chronic Pancreatitis
Case Disease SubType:NA
Case Sample:Type 1 Autoimmune Pancreatitis
Control Sample:Healthy
Number of Case:10
Number of Control:10
Number of Samples:20





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ACTN4
chr19
38647649
38731589
+
CBX1
chr17
48070052
48101478
-
EPHB4
chr7
100802565
100827523
-
FOXP4
chr6
41546426
41602384
+
GOSR2
chr17
46923075
46975524
+
RFX1
chr19
13961530
14007039
-
WDR5
chr9
134135365
134159968
+
ZCCHC3
chr20
297570
300321
+
GNL1
chr6
30541377
30557174
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC016876.2
chr17
7581964
7584086
-
AL132655.2
chr20
58817132
58817725
-
AL355075.4
chr14
20343048
20343685
-
AL356488.2
chr1
109100193
109100619
+
KCNQ1OT1
chr11
2608328
2699994
-
MIR34AHG
chr1
9148011
9198906
-
MIR663AHG
chr20
26167817
26251546
-
NEAT1
chr11
65422774
65445540
+
NORAD
chr20
36045618
36051018
-
STAG3L5P-PVRIG2P-PILRB
chr7
100336104
100367831
+
Display:



Experiment Detail

GEO ID:GSE128508
Sample Source:Blood
Source Fraction:Exosome
Platform:GPL21263
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:1958
Sample treatment protocol:Exosomes were isolated using the ExoQuick exosome precipitation kit.
RNA Extract protocol:total RNA was extracted from cells using miRNesy mini kit (Qiagen).
RNA library preparation protocol:Extracted total RNA was labeled with Cy5 using the 3D-Gene miRNA labeling kit (Toray, Kamakura, Japan).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA