exRNAdisease

Entry Detail

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General Information

Database ID: exR0262158 RNA Name: hsa-miR-3609 RNA Type: miRNA Chromosome: chr7 Starnd: + Coordinate: Start Site(bp): 98881700 End Site(bp): 98881723 External Links: hsa-miR-3609

Disease Information

Disease Name: Prostate Cancer Disease Category: Cancers MeSH ID: D011471 Type: Neoplasms/Digestive System Neoplasms Alias: Prostatic Neoplasms//Prostate Neoplasms//Neoplasms, Prostate//Neoplasm, Prostate//Prostate Neoplasm//Neoplasms, Prostatic//Neoplasm, Prostatic//Prostatic Neoplasm//Prostate Cancer//Cancer, Prostate//Cancers, Prostate//Prostate Cancers//Cancer of the Prostate//Prostatic Cancer//Cancer, Prostatic//Cancers, Prostatic//Prostatic Cancers//Cancer of Prostate

Expression Detail

GEO ID: GSE134266 Description: Deep sequencing identified serum extracellular vesicle delivered miR-181a-5p as an indicator for bone-metastatic prostate cancer (microarray) Experimental Design: Cancer vs Control Case Disease Type: Prostate Cancer Case Disease SubType: Bone Metastatic Prostate Cancer Case Sample: Bone Metastatic Prostate Cancer Control Sample: Benign Prostatic Hyperplasia Number of Case: 8 Number of Control: 9 Number of Samples: 17

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand IGF2 chr11 2129112 2141238 - MAP3K7 chr6 90513573 90587072 - MYH9 chr22 36281277 36388067 - PIK3C2A chr11 17077730 17207983 - CCNY chr10 35247025 35572669 + CCT2 chr12 69585426 69601570 + GPRIN3 chr4 89236383 89307800 - ING5 chr2 241687085 241729478 + NUP98 chr11 3671083 3797792 - P2RX5-TAX1BP3 chr17 3663063 3696194 - PBX2 chr6 32184733 32190202 - RPLP0 chr12 120196699 120201235 - TAX1BP3 chr17 3662895 3668679 - WDR74 chr11 62832342 62841809 - miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AL356488.2 chr1 109100193 109100619 + Display:

Experiment Detail

GEO ID: GSE134266 Sample Source: Blood Source Fraction: Extracellular Vesicle Platform: GPL25134 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 2519 Sample treatment protocol: The blood was centrifuged at 2000 g for 10 min at 4 °C to extract the serum. The serum EV was extracted using Total Exosome Isolation Kit (from serum, Thermo fisher scientific). RNA Extract protocol: Exosome Purification and RNA Isolation Kit (Norgen Biotek) was employed to purify EV and extract total RNA in EV consequentially. RNA library preparation protocol: Sample tag and reagents are included in the hybrid need Agilent's micrornas Complete Labeling and Hyb Kit (p/n 5190-0456).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA