Entry Detail



General Information

Database ID:exR0270762
RNA Name:tRF-Gln-TTG-006
RNA Type:tRF
Chromosome:
Starnd:
Coordinate:
Start Site(bp):End Site(bp):



Disease Information

Disease Name:Nodular Goiter
Disease Category:Other Diseases
MeSH ID:D006044
Type:Diseases Category/Endocrine System Diseases
Alias:Goiter, Nodular//Goiters, Nodular//Nodular Goiters//Nodular Goiter



Expression Detail

GEO ID:GSE140144
Description:Serum tRNA-derived fragment (tRF-Pro-AGG-018) as a novel diagnostic biomarker for discriminating papillary thyroid carcinoma from nodular goiter
Experimental Design:Cancer vs Control
Case Disease Type:Papillary Thyroid Cancer
Case Disease SubType:NA
Case Sample:Nodular Goiter
Control Sample:Healthy
Number of Case:6
Number of Control:6
Number of Samples:12





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
circRNA targets:
circRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
Display:



Experiment Detail

GEO ID:GSE140144
Sample Source:Blood
Source Fraction:Serum
Platform:GPL18573
Method:NGS
Num of detected RNA Type:1
Num of detected RNAs of this Type:614
Sample treatment protocol:Total RNA samples are pretreated to remove some RNA modifications that interfere with small RNA-seq library construction.
RNA Extract protocol:Total RNA from patients' sera were isolated with TRIzol LS Reagent (Life Technologies, USA), following the manufacturer's protocols.
RNA library preparation protocol:134-160 bp PCR amplified fragments were extracted and purified from the PAGE gel.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA