Entry Detail


General Information

Database ID:exR0349565
RNA Name:hsa-miR-1286
RNA Type:miRNA
Chromosome:chr22
Starnd:-
Coordinate:
Start Site(bp):20249145End Site(bp):20249165
External Links:hsa-miR-1286



Disease Information

Disease Name:Hepatocellular Carcinoma
Disease Category:Cancers
MeSH ID:D006528
Type:Neoplasms/Digestive System Neoplasms
Alias:Carcinoma, Hepatocellular//Carcinomas, Hepatocellular//Hepatocellular Carcinomas//Liver Cell Carcinoma, Adult//Liver Cancer, Adult//Adult Liver Cancer//Adult Liver Cancers//Cancer, Adult Liver//Cancers, Adult Liver//Liver Cancers, Adult//Liver Cell Carcinoma//Carcinoma, Liver Cell//Carcinomas, Liver Cell//Cell Carcinoma, Liver//Cell Carcinomas, Liver//Liver Cell Carcinomas//Hepatocellular Carcinoma//Hepatoma//Hepatomas



Expression Detail

GEO ID:GSE85679
Description:Serum miRNA in liver disease
Experimental Design:Surgery treatment
Case Disease Type:Hepatocellular Carcinoma
Case Disease SubType:NA
Case Sample:Hepatocellular Carcinoma Post surgery 4
Control Sample:Pre surgery
Number of Case:98
Number of Control:98
Number of Samples:196





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
TRIO
chr5
14143342
14532128
+
TXLNA
chr1
32179675
32198285
+
CSNK1E
chr22
38290691
38318084
-
NT5DC2
chr3
52524385
52535054
-
ERLIN1
chr10
100150094
100186033
-
BTG2
chr1
203305491
203309602
+
GOLGA3
chr12
132768914
132829078
-
ABCA2
chr9
137007234
137028922
-
SSR2
chr1
156009048
156020951
-
LUZP1
chr1
23084023
23177808
-
RUBCN
chr3
197668867
197749727
-
CBX6
chr22
38861422
38872249
-
KMT2A
chr11
118436490
118526832
+
LAMTOR1
chr11
72085895
72103297
-
PHF12
chr17
28905250
28951771
-
NPTX1
chr17
80466834
80477843
-
ZXDB
chrX
57591652
57597545
+
PHLDA3
chr1
201464278
201469237
-
NIPSNAP1
chr22
29554808
29581327
-
IGDCC3
chr15
65327127
65378002
-
TNRC6B
chr22
40044817
40335808
+
DNAJC30
chr7
73680918
73683453
-
ALG10B
chr12
38316762
38329721
+
RBM4
chr11
66638617
66668374
+
ABHD14B
chr3
51968510
51983409
-
ATXN2L
chr16
28823035
28837237
+
CPA4
chr7
130293134
130324180
+
FGFR1
chr8
38400215
38468834
-
HDGF
chr1
156742109
156766925
-
ATP8B2
chr1
154325553
154351304
+
miRNA targets:NA
circRNA targets:
circRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa_circ_0001588
chr6
26204839
26205043
+
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC010327.5
chr19
55216660
55221616
+
AC016876.2
chr17
7581964
7584086
-
AC124068.2
chr15
89335053
89336161
+
DNAAF4-CCPG1
chr15
55355248
55498360
-
MIR497HG
chr17
7015818
7019659
-
NEAT1
chr11
65422774
65445540
+
Display:



Experiment Detail

GEO ID:GSE85679
Sample Source:Blood
Source Fraction:Serum
Platform:GPL18941
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:2524
Sample treatment protocol:NA
RNA Extract protocol:RNA samples were extracted from serum using 3D-Gene RNA extraction reagent from liquid sampld (Toray Industries Inc., Tokyo, Japan).
RNA library preparation protocol:Extracted total RNA was labeled with Cy5 using the 3D-Gene miRNA labeling kit (Toray Industries Inc., Tokyo, Japan).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA