Entry Detail


General Information

Database ID:exR0349702
RNA Name:hsa-miR-185-5p
RNA Type:miRNA
Chromosome:chr22
Starnd:+
Coordinate:
Start Site(bp):20033153End Site(bp):20033174
External Links:hsa-miR-185-5p



Disease Information

Disease Name:Hepatocellular Carcinoma
Disease Category:Cancers
MeSH ID:D006528
Type:Neoplasms/Digestive System Neoplasms
Alias:Carcinoma, Hepatocellular//Carcinomas, Hepatocellular//Hepatocellular Carcinomas//Liver Cell Carcinoma, Adult//Liver Cancer, Adult//Adult Liver Cancer//Adult Liver Cancers//Cancer, Adult Liver//Cancers, Adult Liver//Liver Cancers, Adult//Liver Cell Carcinoma//Carcinoma, Liver Cell//Carcinomas, Liver Cell//Cell Carcinoma, Liver//Cell Carcinomas, Liver//Liver Cell Carcinomas//Hepatocellular Carcinoma//Hepatoma//Hepatomas



Expression Detail

GEO ID:GSE85679
Description:Serum miRNA in liver disease
Experimental Design:Surgery treatment
Case Disease Type:Hepatocellular Carcinoma
Case Disease SubType:NA
Case Sample:Hepatocellular Carcinoma Post surgery 4
Control Sample:Pre surgery
Number of Case:98
Number of Control:98
Number of Samples:196





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
TFAP2A
chr6
10393186
10419659
-
SSH2
chr17
29625938
29930276
-
ZBTB4
chr17
7459366
7484263
-
CTSA
chr20
45890144
45898820
+
TSPAN14
chr10
80454166
80533124
+
ACVR1B
chr12
51951699
51997078
+
GRB2
chr17
75318076
75405709
-
RAB5A
chr3
19947097
19985175
+
RAB40C
chr16
589357
629272
+
VPS37B
chr12
122865330
122896127
-
SLC29A1
chr6
44219553
44234142
+
NDRG1
chr8
133237171
133302022
-
HDLBP
chr2
241227264
241317061
-
RSU1
chr10
16590611
16817463
-
HADHA
chr2
26190635
26244672
-
VPS4A
chr16
69311350
69326939
+
IGF2BP1
chr17
48997385
49056145
+
NF1
chr17
31094927
31382116
+
SMAD3
chr15
67063763
67195169
+
ORAI1
chr12
121626550
121642677
+
ADGRG1
chr16
57610652
57665580
+
TNRC6B
chr22
40044817
40335808
+
ZMIZ1
chr10
79068966
79316528
+
GOLGA1
chr9
124878275
124948492
-
ZBTB38
chr3
141324213
141449792
+
SLC29A2
chr11
66362521
66372214
-
GATAD2B
chr1
153789030
153923360
-
GBA2
chr9
35736866
35749228
-
OTUD4
chr4
145110838
145180589
-
FAM234A
chr16
234521
272183
+
miRNA targets:NA
circRNA targets:
circRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa_circ_0001658
chr6
157357968
157406039
+
hsa_circ_0000711
chr16
68155889
68160513
+
hsa_circ_0001168
chr20
47691321
47707559
+
hsa_circ_0001146
chr20
34241449
34246936
-
hsa_circ_0001164
chr20
45891031
45923523
-
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC007952.4
chr17
19112000
19112636
-
AC008040.1
chr3
169939353
169966734
-
AC021092.1
chr19
44103007
44113183
-
LINC01278
chrX
63222993
63561095
-
MALAT1
chr11
65497688
65506516
+
MIR137HG
chr1
97933474
98049863
-
MIR663AHG
chr20
26167817
26251546
-
NEAT1
chr11
65422774
65445540
+
XIST
chrX
73820649
73852723
-
Display:



Experiment Detail

GEO ID:GSE85679
Sample Source:Blood
Source Fraction:Serum
Platform:GPL18941
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:2524
Sample treatment protocol:NA
RNA Extract protocol:RNA samples were extracted from serum using 3D-Gene RNA extraction reagent from liquid sampld (Toray Industries Inc., Tokyo, Japan).
RNA library preparation protocol:Extracted total RNA was labeled with Cy5 using the 3D-Gene miRNA labeling kit (Toray Industries Inc., Tokyo, Japan).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA