Entry Detail


General Information

Database ID:exR0349750
RNA Name:hsa-miR-198
RNA Type:miRNA
Chromosome:chr3
Starnd:-
Coordinate:
Start Site(bp):120395703End Site(bp):120395724
External Links:hsa-miR-198



Disease Information

Disease Name:Hepatocellular Carcinoma
Disease Category:Cancers
MeSH ID:D006528
Type:Neoplasms/Digestive System Neoplasms
Alias:Carcinoma, Hepatocellular//Carcinomas, Hepatocellular//Hepatocellular Carcinomas//Liver Cell Carcinoma, Adult//Liver Cancer, Adult//Adult Liver Cancer//Adult Liver Cancers//Cancer, Adult Liver//Cancers, Adult Liver//Liver Cancers, Adult//Liver Cell Carcinoma//Carcinoma, Liver Cell//Carcinomas, Liver Cell//Cell Carcinoma, Liver//Cell Carcinomas, Liver//Liver Cell Carcinomas//Hepatocellular Carcinoma//Hepatoma//Hepatomas



Expression Detail

GEO ID:GSE85679
Description:Serum miRNA in liver disease
Experimental Design:Surgery treatment
Case Disease Type:Hepatocellular Carcinoma
Case Disease SubType:NA
Case Sample:Hepatocellular Carcinoma Post surgery 4
Control Sample:Pre surgery
Number of Case:98
Number of Control:98
Number of Samples:196





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
C18orf25
chr18
46173553
46266992
+
CGN
chr1
151510510
151538692
+
CS
chr12
56271699
56300391
-
FSTL1
chr3
120392293
120450993
-
UBE2K
chr4
39698109
39782792
+
CCDC103
chr17
44899142
44905390
+
CLTC
chr17
59619689
59696956
+
FAM187A
chr17
44899712
44905390
+
LRRC20
chr10
70298970
70382650
-
MAP1B
chr5
72107234
72209565
+
NECTIN2
chr19
44846175
44889223
+
RRP7A
chr22
42508344
42519796
-
TPGS2
chr18
36777647
36829216
-
TUBA1A
chr12
49184795
49189080
-
ZNF281
chr1
200404940
200410056
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
FTX
chrX
73940435
74293574
-
Display:



Experiment Detail

GEO ID:GSE85679
Sample Source:Blood
Source Fraction:Serum
Platform:GPL18941
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:2524
Sample treatment protocol:NA
RNA Extract protocol:RNA samples were extracted from serum using 3D-Gene RNA extraction reagent from liquid sampld (Toray Industries Inc., Tokyo, Japan).
RNA library preparation protocol:Extracted total RNA was labeled with Cy5 using the 3D-Gene miRNA labeling kit (Toray Industries Inc., Tokyo, Japan).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA