Entry Detail


General Information

Database ID:exR0349890
RNA Name:hsa-miR-302d-3p
RNA Type:miRNA
Chromosome:chr4
Starnd:-
Coordinate:
Start Site(bp):112648006End Site(bp):112648028
External Links:hsa-miR-302d-3p



Disease Information

Disease Name:Hepatocellular Carcinoma
Disease Category:Cancers
MeSH ID:D006528
Type:Neoplasms/Digestive System Neoplasms
Alias:Carcinoma, Hepatocellular//Carcinomas, Hepatocellular//Hepatocellular Carcinomas//Liver Cell Carcinoma, Adult//Liver Cancer, Adult//Adult Liver Cancer//Adult Liver Cancers//Cancer, Adult Liver//Cancers, Adult Liver//Liver Cancers, Adult//Liver Cell Carcinoma//Carcinoma, Liver Cell//Carcinomas, Liver Cell//Cell Carcinoma, Liver//Cell Carcinomas, Liver//Liver Cell Carcinomas//Hepatocellular Carcinoma//Hepatoma//Hepatomas



Expression Detail

GEO ID:GSE85679
Description:Serum miRNA in liver disease
Experimental Design:Surgery treatment
Case Disease Type:Hepatocellular Carcinoma
Case Disease SubType:NA
Case Sample:Hepatocellular Carcinoma Post surgery 4
Control Sample:Pre surgery
Number of Case:98
Number of Control:98
Number of Samples:196





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
POLR3G
chr5
90471748
90514557
+
RPL27
chr17
42998273
43002959
+
MSL1
chr17
40121971
40136917
+
MGLL
chr3
127689062
128052190
-
WASF3
chr13
26557683
26688948
+
CCNE1
chr19
29811991
29824312
+
PPIB
chr15
64155812
64163205
-
CDK6
chr7
92604921
92836594
-
CLOCK
chr4
55427903
55546909
-
QRICH1
chr3
49029707
49094363
-
FBXO5
chr6
152970519
152983579
-
VPS35
chr16
46656132
46689518
-
PXYLP1
chr3
141228726
141367753
+
ATP6V1C1
chr8
103021063
103073051
+
FYCO1
chr3
45917899
45995824
-
TXNIP
chr1
145992435
145996579
-
KDM4B
chr19
4969113
5153598
+
PNPLA8
chr7
108470417
108569666
-
AMPD2
chr1
109616104
109632053
+
MMD
chr17
55392622
55421924
-
ZNF608
chr5
124636913
124748807
-
PLAGL2
chr20
32192504
32207743
-
EPHX1
chr1
225810092
225845563
+
COPS5
chr8
67043079
67083783
-
MRPS6
chr21
34073224
34143034
+
RIT1
chr1
155897808
155911404
-
HNRNPH2
chrX
101408222
101414133
+
BCLAF1
chr6
136256627
136289851
-
BTN3A1
chr6
26402237
26415208
+
COL4A2
chr13
110305812
110513209
+
miRNA targets:NA
circRNA targets:
circRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa_circ_0000943
chr19
47421744
47440665
+
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC011503.2
chr19
23927788
23929287
+
AL049840.4
chr14
103694516
103695050
-
ARHGAP27P1-BPTFP1-KPNA2P3
chr17
64749663
64781707
-
FGD5-AS1
chr3
14920347
14948424
-
MIR17HG
chr13
91347820
91354579
+
NEAT1
chr11
65422774
65445540
+
NORAD
chr20
36045618
36051018
-
SNHG16
chr17
76557764
76565348
+
XIST
chrX
73820649
73852723
-
Display:



Experiment Detail

GEO ID:GSE85679
Sample Source:Blood
Source Fraction:Serum
Platform:GPL18941
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:2524
Sample treatment protocol:NA
RNA Extract protocol:RNA samples were extracted from serum using 3D-Gene RNA extraction reagent from liquid sampld (Toray Industries Inc., Tokyo, Japan).
RNA library preparation protocol:Extracted total RNA was labeled with Cy5 using the 3D-Gene miRNA labeling kit (Toray Industries Inc., Tokyo, Japan).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA