Entry Detail


General Information

Database ID:exR0350125
RNA Name:hsa-miR-3652
RNA Type:miRNA
Chromosome:chr12
Starnd:+
Coordinate:
Start Site(bp):103930425End Site(bp):103930442
External Links:hsa-miR-3652



Disease Information

Disease Name:Hepatocellular Carcinoma
Disease Category:Cancers
MeSH ID:D006528
Type:Neoplasms/Digestive System Neoplasms
Alias:Carcinoma, Hepatocellular//Carcinomas, Hepatocellular//Hepatocellular Carcinomas//Liver Cell Carcinoma, Adult//Liver Cancer, Adult//Adult Liver Cancer//Adult Liver Cancers//Cancer, Adult Liver//Cancers, Adult Liver//Liver Cancers, Adult//Liver Cell Carcinoma//Carcinoma, Liver Cell//Carcinomas, Liver Cell//Cell Carcinoma, Liver//Cell Carcinomas, Liver//Liver Cell Carcinomas//Hepatocellular Carcinoma//Hepatoma//Hepatomas



Expression Detail

GEO ID:GSE85679
Description:Serum miRNA in liver disease
Experimental Design:Surgery treatment
Case Disease Type:Hepatocellular Carcinoma
Case Disease SubType:NA
Case Sample:Hepatocellular Carcinoma Post surgery 4
Control Sample:Pre surgery
Number of Case:98
Number of Control:98
Number of Samples:196





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ATP5MC3
chr2
175176258
175184607
-
GANAB
chr11
62624826
62646726
-
HDLBP
chr2
241227264
241317061
-
PGRMC1
chrX
119236245
119244466
+
PTMA
chr2
231706895
231713541
+
RAB15
chr14
64945814
64973226
-
AC099811.2
chr17
42119674
42154916
-
AP2A1
chr19
49766968
49807113
+
AP2M1
chr3
184174689
184184091
+
ARHGAP33
chr19
35774532
35788822
+
BDNF
chr11
27654893
27722058
-
BRI3
chr7
98252379
98310441
+
CCT6A
chr7
56051685
56063989
+
FKBP8
chr19
18531751
18544077
-
GATC
chr12
120446444
120463749
+
GDF11
chr12
55743122
55757264
+
HLA-DRA
chr6
32439878
32445046
+
HSP90B1
chr12
103930107
103953645
+
MIB2
chr1
1615415
1630610
+
RAB5C
chr17
42124976
42155044
-
SF3A2
chr19
2236824
2248655
+
SFPQ
chr1
35176378
35193145
-
WASF1
chr6
110099819
110180004
-
WBP11
chr12
14784582
14803486
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC022819.1
chr15
99157231
99161140
-
AL591742.2
chr1
114032393
114034511
+
Display:



Experiment Detail

GEO ID:GSE85679
Sample Source:Blood
Source Fraction:Serum
Platform:GPL18941
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:2524
Sample treatment protocol:NA
RNA Extract protocol:RNA samples were extracted from serum using 3D-Gene RNA extraction reagent from liquid sampld (Toray Industries Inc., Tokyo, Japan).
RNA library preparation protocol:Extracted total RNA was labeled with Cy5 using the 3D-Gene miRNA labeling kit (Toray Industries Inc., Tokyo, Japan).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA