Entry Detail


General Information

Database ID:exR0350396
RNA Name:hsa-miR-4426
RNA Type:miRNA
Chromosome:chr1
Starnd:+
Coordinate:
Start Site(bp):192716333End Site(bp):192716349
External Links:hsa-miR-4426



Disease Information

Disease Name:Hepatocellular Carcinoma
Disease Category:Cancers
MeSH ID:D006528
Type:Neoplasms/Digestive System Neoplasms
Alias:Carcinoma, Hepatocellular//Carcinomas, Hepatocellular//Hepatocellular Carcinomas//Liver Cell Carcinoma, Adult//Liver Cancer, Adult//Adult Liver Cancer//Adult Liver Cancers//Cancer, Adult Liver//Cancers, Adult Liver//Liver Cancers, Adult//Liver Cell Carcinoma//Carcinoma, Liver Cell//Carcinomas, Liver Cell//Cell Carcinoma, Liver//Cell Carcinomas, Liver//Liver Cell Carcinomas//Hepatocellular Carcinoma//Hepatoma//Hepatomas



Expression Detail

GEO ID:GSE85679
Description:Serum miRNA in liver disease
Experimental Design:Surgery treatment
Case Disease Type:Hepatocellular Carcinoma
Case Disease SubType:NA
Case Sample:Hepatocellular Carcinoma Post surgery 4
Control Sample:Pre surgery
Number of Case:98
Number of Control:98
Number of Samples:196





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
UFC1
chr1
161152776
161158856
+
NDUFA4
chr7
10931943
10940153
-
N4BP3
chr5
178113532
178126081
+
MTRNR2L11
chr1
237943724
237945275
-
RNF181
chr2
85595725
85597708
+
VMP1
chr17
59707192
59842255
+
DDB1
chr11
61299451
61342596
-
SAP18
chr13
21140514
21149084
+
DOCK6
chr19
11199295
11262524
-
NSMAF
chr8
58583508
58659853
-
APP
chr21
25880550
26171128
-
TMEM170A
chr16
75443054
75465497
-
TKFC
chr11
61333210
61353295
+
CTSZ
chr20
58995185
59007254
-
AL136454.1
chr1
192716132
192716653
+
TPT1
chr13
45333471
45341370
-
PTPN6
chr12
6946468
6961316
+
CAPNS1
chr19
36139953
36150353
+
CCNL2
chr1
1385711
1399335
-
RABGAP1L
chr1
174159410
174995308
+
RACK1
chr5
181236897
181248096
-
HMGN2
chr1
26472440
26476642
+
SEZ6L2
chr16
29871159
29899547
-
GAPDH
chr12
6534512
6538374
+
CD52
chr1
26317958
26320523
+
PCBP2
chr12
53452102
53481162
+
NDUFA11
chr19
5891276
5904006
-
REXO1
chr19
1815248
1848483
-
ZNF655
chr7
99558406
99576453
+
DCAF12
chr9
34086387
34127399
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC023509.1
chr12
53441741
53467528
+
AC105942.1
chr1
94927361
94963616
+
Display:



Experiment Detail

GEO ID:GSE85679
Sample Source:Blood
Source Fraction:Serum
Platform:GPL18941
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:2524
Sample treatment protocol:NA
RNA Extract protocol:RNA samples were extracted from serum using 3D-Gene RNA extraction reagent from liquid sampld (Toray Industries Inc., Tokyo, Japan).
RNA library preparation protocol:Extracted total RNA was labeled with Cy5 using the 3D-Gene miRNA labeling kit (Toray Industries Inc., Tokyo, Japan).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA