Entry Detail


General Information

Database ID:exR0351172
RNA Name:hsa-miR-574-5p
RNA Type:miRNA
Chromosome:chr4
Starnd:+
Coordinate:
Start Site(bp):38868056End Site(bp):38868078
External Links:hsa-miR-574-5p



Disease Information

Disease Name:Hepatocellular Carcinoma
Disease Category:Cancers
MeSH ID:D006528
Type:Neoplasms/Digestive System Neoplasms
Alias:Carcinoma, Hepatocellular//Carcinomas, Hepatocellular//Hepatocellular Carcinomas//Liver Cell Carcinoma, Adult//Liver Cancer, Adult//Adult Liver Cancer//Adult Liver Cancers//Cancer, Adult Liver//Cancers, Adult Liver//Liver Cancers, Adult//Liver Cell Carcinoma//Carcinoma, Liver Cell//Carcinomas, Liver Cell//Cell Carcinoma, Liver//Cell Carcinomas, Liver//Liver Cell Carcinomas//Hepatocellular Carcinoma//Hepatoma//Hepatomas



Expression Detail

GEO ID:GSE85679
Description:Serum miRNA in liver disease
Experimental Design:Surgery treatment
Case Disease Type:Hepatocellular Carcinoma
Case Disease SubType:NA
Case Sample:Hepatocellular Carcinoma Post surgery 4
Control Sample:Pre surgery
Number of Case:98
Number of Control:98
Number of Samples:196





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
CCDC88C
chr14
91271323
91417844
-
CARMIL1
chr6
25279078
25620530
+
AHCYL1
chr1
109984765
110023742
+
ARID3A
chr19
925781
975939
+
CHD7
chr8
60678740
60868028
+
IDH3A
chr15
78131498
78171945
+
FAM102A
chr9
127940582
127980989
-
EEF2K
chr16
22206278
22288738
+
LRP8
chr1
53242364
53328469
-
SMCO4
chr11
93478472
93543391
-
ALDOA
chr16
30064164
30070457
+
ZNF621
chr3
40524878
40574685
+
MAP7D1
chr1
36155579
36180849
+
RAB10
chr2
26034084
26137454
+
TACC1
chr8
38728186
38853028
+
KLF11
chr2
10042849
10054836
+
TEAD1
chr11
12674421
12944737
+
MGRN1
chr16
4616493
4690974
+
SLC9A1
chr1
27098809
27166981
-
FNDC3A
chr13
48975912
49209779
+
SLC25A43
chrX
119399336
119454478
+
CTSD
chr11
1752755
1764573
-
PHF20L1
chr8
132775358
132848807
+
DCAF8
chr1
160215715
160262549
-
PIK3R3
chr1
46040140
46133036
-
RHOU
chr1
228735479
228746664
+
GALNT3
chr2
165747588
165794659
-
HOXC8
chr12
54008985
54012769
+
NID1
chr1
235975830
236065109
-
WSB2
chr12
118032694
118062430
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC005394.2
chr19
28435388
28727680
-
AC021092.1
chr19
44103007
44113183
-
AL358472.3
chr1
153966516
153966930
+
DSCAM-AS1
chr21
40383083
40385358
+
NEAT1
chr11
65422774
65445540
+
SNHG7
chr9
136721366
136728184
-
XIST
chrX
73820649
73852723
-
Display:



Experiment Detail

GEO ID:GSE85679
Sample Source:Blood
Source Fraction:Serum
Platform:GPL18941
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:2524
Sample treatment protocol:NA
RNA Extract protocol:RNA samples were extracted from serum using 3D-Gene RNA extraction reagent from liquid sampld (Toray Industries Inc., Tokyo, Japan).
RNA library preparation protocol:Extracted total RNA was labeled with Cy5 using the 3D-Gene miRNA labeling kit (Toray Industries Inc., Tokyo, Japan).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA