Entry Detail



General Information

Database ID:exR0355178
RNA Name:DHRS4-AS1
RNA Type:lncRNA
Chromosome:chr14
Starnd:-
Coordinate:
Start Site(bp):23938219End Site(bp):24052555
External Links:ENSG00000215256



Disease Information

Disease Name:Rheumatoid Arthritis
Disease Category:Musculoskeletal Diseases
MeSH ID:D001172
Type:Diseases Category/Musculoskeletal Diseases
Alias:Arthritis, Rheumatoid//Rheumatoid Arthritis



Expression Detail

GEO ID:GSE94519
Description:Long noncoding RNAs expression profile in patients with rheumatoid arthritis
Experimental Design:Disease vs Control
Case Disease Type:Rheumatoid Arthritis
Case Disease SubType:NA
Case Sample:Rheumatoid Arthritis
Control Sample:Healthy
Number of Case:3
Number of Control:3
Number of Samples:6





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AHCY
chr20
34280268
34311802
-
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-140-5p
chr16
69933103
69933124
+
hsa-miR-143-3p
chr5
149428978
149428998
+
hsa-miR-522-3p
chr19
53751264
53751285
+
hsa-miR-584-5p
chr5
149062373
149062394
-
hsa-miR-660-5p
chrX
50013256
50013277
+
hsa-miR-545-5p
chrX
74287164
74287185
-
hsa-miR-624-3p
chr14
31014669
31014689
-
hsa-miR-513b-5p
chrX
147199093
147199114
-
hsa-miR-224-3p
chrX
151958584
151958606
-
hsa-miR-2681-3p
chr13
101967665
101967686
-
hsa-miR-6088
chr19
45436654
45436673
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC084082.1
chr8
66112667
66126632
+
Display:



Experiment Detail

GEO ID:GSE94519
Sample Source:Blood
Source Fraction:Serum
Platform:GPL20115
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:1224
Sample treatment protocol:All blood samples were separately collected and sequentially centrifuged at 2000 rpm for 10 min. The cell-free serum from the supernatant was stored at -80°C for further detection.
RNA Extract protocol:RNA was prepared using the Versagene Blood RNA Purification kit (Gentra Systems, Minneapolis MN).
RNA library preparation protocol:Cyanine-3 (Cy3) labeled cRNA was prepared from 0.5 ug RNA using the One-Color Low RNA Input Linear Amplification PLUS kit (Agilent) according to the manufacturer's instructions, followed by RNAeasy column purification (QIAGEN, Valencia, CA).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA