Entry Detail



General Information

Database ID:exR0355209
RNA Name:DSCAM-AS1
RNA Type:lncRNA
Chromosome:chr21
Starnd:+
Coordinate:
Start Site(bp):40383083End Site(bp):40385358
External Links:ENSG00000235123



Disease Information

Disease Name:Rheumatoid Arthritis
Disease Category:Musculoskeletal Diseases
MeSH ID:D001172
Type:Diseases Category/Musculoskeletal Diseases
Alias:Arthritis, Rheumatoid//Rheumatoid Arthritis



Expression Detail

GEO ID:GSE94519
Description:Long noncoding RNAs expression profile in patients with rheumatoid arthritis
Experimental Design:Disease vs Control
Case Disease Type:Rheumatoid Arthritis
Case Disease SubType:NA
Case Sample:Rheumatoid Arthritis
Control Sample:Healthy
Number of Case:3
Number of Control:3
Number of Samples:6





Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-509-3p
chrX
147258775
147258796
-
hsa-miR-144-5p
chr17
28861583
28861604
-
hsa-miR-3163
chr11
66934476
66934497
-
hsa-miR-3174
chr15
90006764
90006786
+
hsa-miR-433-3p
chr14
100881949
100881970
+
hsa-miR-4784
chr2
131491208
131491227
-
hsa-miR-513b-5p
chrX
147199093
147199114
-
hsa-miR-494-3p
chr14
101029681
101029702
+
hsa-miR-580-3p
chr5
36147907
36147928
-
hsa-miR-3150a-3p
chr8
95072962
95072983
+
hsa-miR-186-5p
chr1
71067681
71067702
-
hsa-miR-3150b-3p
chr8
95072924
95072944
-
hsa-miR-3612
chr12
128294105
128294126
+
hsa-miR-204-5p
chr9
70810031
70810052
-
hsa-miR-122-5p
chr18
58451088
58451109
+
hsa-miR-380-3p
chr14
101025056
101025077
+
hsa-miR-374a-3p
chrX
74287295
74287316
-
hsa-miR-299-3p
chr14
101023832
101023853
+
hsa-miR-136-5p
chr14
100884716
100884738
+
hsa-miR-2355-3p
chr2
207109999
207110020
-
hsa-miR-6849-5p
chr8
144400318
144400340
-
hsa-miR-877-5p
chr6
30584332
30584351
+
hsa-miR-3611
chr10
35079609
35079629
-
hsa-miR-577
chr4
114656774
114656794
+
hsa-miR-5094
chr15
89850690
89850711
-
hsa-miR-6763-5p
chr12
132582002
132582020
+
hsa-miR-650
chr22
22822791
22822811
+
hsa-miR-6875-5p
chr7
100868041
100868061
+
hsa-miR-2681-3p
chr13
101967665
101967686
-
hsa-miR-147a
chr9
120244985
120245004
-
circRNA targets:NA
lncRNA targets:NA
Display:



Experiment Detail

GEO ID:GSE94519
Sample Source:Blood
Source Fraction:Serum
Platform:GPL20115
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:1224
Sample treatment protocol:All blood samples were separately collected and sequentially centrifuged at 2000 rpm for 10 min. The cell-free serum from the supernatant was stored at -80°C for further detection.
RNA Extract protocol:RNA was prepared using the Versagene Blood RNA Purification kit (Gentra Systems, Minneapolis MN).
RNA library preparation protocol:Cyanine-3 (Cy3) labeled cRNA was prepared from 0.5 ug RNA using the One-Color Low RNA Input Linear Amplification PLUS kit (Agilent) according to the manufacturer's instructions, followed by RNAeasy column purification (QIAGEN, Valencia, CA).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA